ENST00000505347.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000505347.1

Source

Gencode19

Same with

lnc-LCORL-2:1,NONHSAT095725

Classification

intergenic

Length

641 nt

Genomic location

chr4-:19173958..19458617

Exon number

3

Exons

19173958..19174149,19335287..19335386,19458269..19458617

Genome context

Sequence
000001 CTGCCTCAGC CTCCCGAGTA CGCGGGACCA CAGGCGCCTG CCATCATGCC CGGCTAATTT TTTTTTGTTT GTTTTTGTTT 000080
000081 TTTTGTATTG TTAGTAGAGA CGGGGTTTCA CCATGTTAGC CAGGATGGTC TTGATGTCCT GACCTCGTGA CCCGCCCGCC 000160
000161 TCGGCCTCCC AAAGTGCGAA TGAAAGCTTT AAGAGGGCTG CTTGTTTCTG GCAGCTCTCA GGTTCTTCCT GTCTGCCTCA 000240
000241 GAAGTGGCAT ATTCCACATA CGGGCTGCAT CTTCAGTCTG GACTCATCCT CTTCAAGATG AGACAGGTGG AGCAGAGCTG 000320
000321 CCACCAACCT CCGGTGATTT CCACACAATG TGTCCTAGAA GAAGAGACCC TACACTGGGC TTGTGACCAG CGGAAACTGA 000400
000401 ATCAATGCTG GAGACACATT CTAACAGTCG AATGGGCAGC TCACAGGAGG TGTTTAATTA TTATGAGTCA GCCAACCCAA 000480
000481 TTTTGTGAAC AATGCAACAC GGACAAGAAT GTTTGAAGGC ACCATGATAA TGCCATCCTA TGAGATTTCT TTTTGAAAAA 000560
000561 TTAATTAGCC TTCAATTGTT ACATCTTAAC TGCCGTCTTC TGTCTCCCTA CAAAATCGTA GTCATCTCCT ACTTACCTAC 000640
000641 A
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Predicted Small Protein

Name ENST00000505347.1_smProtein_179:385
Length 69
Molecular weight 7326.3837
Aromaticity 0.0441176470588
Instability index 68.1573529412
Isoelectric point 8.93878173828
Runs 8
Runs residual 0.022853736089
Runs probability 0.0303943649532
Amino acid sequence MKALRGLLVSGSSQVLPVCLRSGIFHIRAASSVWTHPLQDETGGAELPPTSGDFHTMCPR
RRDPTLGL
Secondary structure LLHHHEEEEELLLLEEEEEELLLEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLL
PRMN -
PiMo -