ENST00000412242.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000412242.1

Source

Gencode19

Same with

lnc-IQSEC2-1:1,NONHSAT137170

Classification

intronic(S)

Length

755 nt

Genomic location

chrX-:53241590..53243861

Exon number

2

Exons

53241590..53241921,53243439..53243861

Genome context

Sequence
000001 CCCCACTCCA CATCTGCCTC ATAGGGCTTC CTTGCCTTCC TTCATCTGGC CTTATTGAGG GCAGCCTCTT AGCTCAGCCA 000080
000081 TAGTCTTAGG TTTTGGGTCT CTGTGGTGGG ATTAGGCTGG GCAGAGCTTT GGGAGAAAGG AGCAGGAGAT TCAGCCTTTG 000160
000161 CTTCTGTCCT CTAAGAGCTC CCAGACCACC TGGAGAGGTA AGCATCATAA TTAGACTATA TGTGGTGACA TATAAACAGA 000240
000241 GGCTAAATTG TGTGTTAGAA ACTCTGAGAT ATAGAAGTTC AGAGGAGAGG AAAATAGCTA AGGGTAATAA TCAGGGAAAA 000320
000321 TGTCAGAAAT GAGACTTGAA GGATAGGAAT ATTAAGAAAA AAATGTTCTT TCAATTTCTG AGTTTTTGTT TTGTTTTTTT 000400
000401 TTTTCTTTTT TAGAAAGTTT GAGGCATGAG CCACCATGCC CGGCCCTGTT TTCCATCTTT CAAGGTACTG GAATATTCAA 000480
000481 TGCCATTTTC CCAGCCTTAC AGTTCTAGTC TGGGCATAAA AAACCTTCTC TAAGCACCCT GCATAGAACC ACATTTTAGA 000560
000561 GGCCAGGCGT GGTGGCTCAC GCCTGTAATC CCAGCACTTG GGAGGCCAAG GCGGGCGGAT CACAGGGTCA GGAGTTTGAG 000640
000641 ACCAGCCTGG CCAACATGGT GAAACCCCAT CTCTACTAAA AATACAAAAA TTAGCTGGGC GTGGTGGCGG GCACCTGTAA 000720
000721 TCCCAGCTAC TCGGGAAGCT GAGGCAGGAG AATCG
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Predicted Small Protein

Name ENST00000412242.1_smProtein_425:532
Length 36
Molecular weight 4000.6228
Aromaticity 0.142857142857
Instability index 65.12
Isoelectric point 9.10235595703
Runs 5
Runs residual 0.0382566585956
Runs probability 0.0331390213743
Amino acid sequence MSHHARPCFPSFKVLEYSMPFSQPYSSSLGIKNLL
Secondary structure LLLLLLLLLLLLLEEEELLLLLLLLLLLLLHHHLL
PRMN -
PiMo -