ENST00000441492.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000441492.1

Source

Gencode19

Same with

lnc-PLAC1-1:3

Classification

intergenic

Length

649 nt

Genomic location

chrX-:133678456..133680653

Exon number

3

Exons

133678456..133678827,133679982..133680182,133680578..133680653

Genome context

Sequence
000001 GAAGGTGGGG TCTGCCGGAC GCGTGTTCCT GCCACCAGGT GCCCGCTCCC CGCGAGGCCG GCTCAGGAGC AGGTAGAATG 000080
000081 TAAACAATTG AAAAAAATCC CTTCCCAATC AGAATACCAC CCACAGGACA ACGAAGAAAA CCTATCTTCA GTCCCCACCC 000160
000161 ACGAAATGCT GGGGGGTGGG GAGGACTGGA AAAGGAGTAA GGGGAGAGGA AGGGTGAGCA GCTGCAAGAA GTCTTTACAC 000240
000241 CTCTCTGCGG TTCCTGGTAA ACGCGCTCAT GTCCTGGAAG GAAGCCCGGT GCCAGCCAGC CTTCCTGAAA GACCAAGCCC 000320
000321 GCGCCATCCG GCTTCCTCCA GTGGACGCCT GCAGGACCCA GGTGAGACAC GGAACCGGTT GGGGACGCGA GCCAGGGATC 000400
000401 CTGACCGGTT GGGGGCGGCG AGCAAGGGAT CCTGACTTGG GGGCGTTGCC TCCCGGAATC CAAGCGGCCT TTTGCCCGGG 000480
000481 TCTCCCGAGA TGCATCGAAA TTGAGCTCGT CCACACAGCC CCCTGACTGC GTGATGCCCT TTTCTGACTT AAAACATTCC 000560
000561 TTGTACCTTT ATTTACACGA TCCAAGTTGC AGTGTGCCTA GATTTTCCTC CAAGGACAAA AATGTGAATA AAGCAATATT 000640
000641 TTAGCCAAA
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Predicted Small Protein

Name ENST00000441492.1_smProtein_533:643
Length 37
Molecular weight 4185.7802
Aromaticity 0.138888888889
Instability index 52.15
Isoelectric point 8.97991943359
Runs 5
Runs residual 0.0415695415695
Runs probability 0.0300830242007
Amino acid sequence MPFSDLKHSLYLYLHDPSCSVPRFSSKDKNVNKAIF
Secondary structure LLLLLLLLEEEEEELLLLLLLLLLLLLLLLHHHHLL
PRMN -
PiMo -