ENST00000446102.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000446102.1

Source

Gencode19

Same with

lnc-KIFAP3-2:4,NONHSAT007499

Classification

intergenic

Length

1363 nt

Genomic location

chr1-:170430458..170463681

Exon number

2

Exons

170430458..170431560,170463422..170463681

Genome context

Sequence
000001 GGCTGTGGGA TGGGAGCCAG ATATATTGGA GGGAGGAGGC AAGTAAGTGC TGGAGACCTC AGGATTTTAT TGTAGGGCAC 000080
000081 ATGGACTTTG TATGAGAATG TCAAAAACTC ATTTTGTCTT TAGCACAGGA AGATGCTTGG CAAAGAGTTA ATGACACTAA 000160
000161 AGAATTCTTA CAAATGTTAT GGATGGGTGT TAATTTTCAC AGATAGGCAT TCATTGTCAG ATGTTTATGC TCTCCATTCC 000240
000241 TGAAACTCCT CCTGTCTGTG GATCCCCATC ACAAGGAGGG GAGGGCTACC ATCCCAGCTG CAAACTCTCA TTCAAGGTTT 000320
000321 ATGCTGCAGC CAGCAGTGTC CTTGGAGTCT AGTTCAAAGC TGAAGAGAGT GAACCATGGA ACTGGGAGCC ATTGGCGGAG 000400
000401 AGGCTGGCCT GAAGGAAGGG AAGTGTTTCA GCCAGAATGT ACTGACGCAC AACCAGGAAA CCACAAGACT GGTGAGAACC 000480
000481 TTTCCAAAAC TGAGCTTTAT GATCAAAAGA GGTACAGGAA ACAGCTCTGC CAAGAGTCCT TTCTGCTCCT GGCTGGAACC 000560
000561 CTGAGCTTCT GAGGCTCTCT GAGTCAACTC TCTGAACAGA TGCTGTCACC CAAGGAACCA TCACTAAAGC ATTTTTTTGC 000640
000641 TTTGCTCTGA GGTGGCCTCA CTGGTGGGTG CAAGTGAGTT ACTGTCTCTT TTTCTCTTTC TTGTTTCTTT CTTTTGACAG 000720
000721 AAGTTGCCAT GTGATTACTC AATTCTGAAT TTTAGAGGCC ATAGGTTACT GCATTTATGC CCTTTGCCAA CTGACTATTG 000800
000801 TTTGGTGCTG GGCCTGCATA CAAACACGAC ATCCCCAAAC TCTTATCAAT ACCTAGATCA CCTGATGTGA ATCTATCAAT 000880
000881 ACCCTGGACT TAACAGGGTA TTGAAGGAAA GAGAACCGGC AATTCCTTCA TTTCTTACAT CCCAGCCAGT AGTCCTTCTC 000960
000961 CCAGGCTAGT CTTCCTTTTG TTTCCCCTAA GAATGACTCA ACTAGGAATT GCATTCTGAT CCCTGTCACA GATATAAATC 001040
001041 TTGTCTGGAT ACAAGGTCAA AATAATTGTG TTCCTGTGGA TTCTTTTTCT TTTTTCAACC AGAGTAACTA CCAGTTGCCA 001120
001121 TGAAATAAAT CACATCATCA TATGGCAGAT CCAGCTAATA GCTGAGACTG GCAGGATAAC TGAACCGTGT ACTCAGAGCT 001200
001201 AAATGATGGA GAAATTGGAC TGGCCATGGA GCACTTCAAA TTGATTGCTT AGTAATGGGA TATTTTTCCT GGAAAGACAA 001280
001281 CAGAATACTT CTGAATTGTT GGTTCTGTCA TGGGTACAGG CTCCCATGTA CAGGAAAATA AAGAAAGTGT GATGAATTTT 001360
001361 TCA
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Predicted Small Protein

Name ENST00000446102.1_smProtein_320:571
Length 84
Molecular weight 9490.5669
Aromaticity 0.0843373493976
Instability index 60.6771084337
Isoelectric point 9.09783935547
Runs 9
Runs residual 0.031593038822
Runs probability 0.0332194940039
Amino acid sequence MLQPAVSLESSSKLKRVNHGTGSHWRRGWPEGREVFQPECTDAQPGNHKTGENLSKTELY
DQKRYRKQLCQESFLLLAGTLSF
Secondary structure LLLLEEEEELLLLEEEELLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLHH
HHHHHHHHHHHHHHHHHHLLLLL
PRMN -
PiMo -