ENST00000551187.1
Revision as of 17:31, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000551187.1 |
Source |
Gencode19 |
Same with |
lnc-CDH16-2:1 |
Classification |
antisense |
Length |
434 nt |
Genomic location |
chr16-:66875336..66887351 |
Exon number |
2 |
Exons |
66875336..66875725,66887308..66887351 |
Genome context |
|
Sequence |
000001 GCCGGAAGTT GTTCACCATG TGGATCCTCT CATCGTCCTC CGAGATGAGA AAAGCAAAGC TCAAGAGAGG ATGAGTGATG 000080
000081 GGCTCGAAGA TGCACAGTGA GTGACTGAAC AAAGATGAAA ACCCAGGGCT GCTGGGTCCC TCGTTCAATA TTGTCCAAAA 000160 000161 TCACTGGAAA GGGAGGAAGC GGATTTTAAA TTTGACTCTC ATTTGTGTGT GTATGCAAGT CCTCTCTAAA AGGACTTAGG 000240 000241 AGAAGCTAGG GAGAGTGTTT ACCTACAGGG AGGAGACTGG ACACCGGAAG GTTGTGGAAG GTTGTGGAAG GGTGTGGTAT 000320 000321 GGCGTGGGAA GGACACTCTT TACTGGTACT CCTTTGTATC TCTTGAATGA ATTAAGGCAT GTATTACCTC TTTAACAACC 000400 000401 AAATAAAAGT TGATCCAGTT CTTTCCTTCC TGCA |
Predicted Small Protein
Name | ENST00000551187.1_smProtein_17:73 |
Length | 19 |
Molecular weight | 2108.5307 |
Aromaticity | 0.0555555555556 |
Instability index | 62.7166666667 |
Isoelectric point | 11.0969848633 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.0336866278042 |
Amino acid sequence | MWILSSSSEMRKAKLKRG |
Secondary structure | LEEELLLHHHHHHHHHLL |
PRMN | - |
PiMo | - |