ENST00000554532.2
Revision as of 17:35, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000554532.2 |
Source |
Gencode19 |
Same with |
NONHSAT037782 |
Classification |
sense |
Length |
1367 nt |
Genomic location |
chr14-:74755830..74761128 |
Exon number |
2 |
Exons |
74755830..74756081,74760014..74761128 |
Genome context |
|
Sequence |
000001 TACTGGGAAT CTGCGCTGGG GTGGGGTTGT GAGGTGGGCA GGGCTGGGTG TGTAAAAAAG TTGCTTTTGG AGGCCGGGCA 000080
000081 TGGTGGCTCA TGCCTGTAAT CCCAGCACTT TGGGAGGCCG AGGCGGGTGG ATTGCCTGAG GTCAAGAGTT CGAGACCAGC 000160 000161 CATGGCCAAC ATGGTGAAAC CCTGTCTCTA CTAAAAATAC AAAAAATTAG CTGAGCATGG TGGCGGGCAC CTGTAATCCC 000240 000241 AGCTACTGGG GAGGCTGAGG CAGGAGAATC ACTTGAATCC GGGAGGCAGA GGTTGCAGTA AGGCAAGATC CTGCCATTGC 000320 000321 ACTCCAGCCT GGGTGACAGA GCAAGACTCC GTCTCAAAAA AAAAAAAAGA AAAAAGTTGC TTTTGGATTC TGCAGCCTCT 000400 000401 GCTCATGAAG CTCTGGGGAA GGCAGGTTAG TTTGTAGAGT TTCAGATGAG TTCTTCTGTG GCCTCTGTGC AAAATCTGAA 000480 000481 ATCTCCCTCC ACCTTTTCTG CCTAGCGAAT TTCTTCCCAT CCTTGAAACC CCAGATCACC TCCTCTGGAG AGCCTTCCCA 000560 000561 GACTCCCTTA ATGGCTAAGC CTATCTGCTG CCATGGCCCT GAGGGCACAC TTAGTACTCC TGATTCCAAG TGAAGAATGC 000640 000641 AGTGTGCCTG CCTGCCCTCT GGACTGAGAG CTCCTCAAAG ACAGAGATAA TTTTCTCATT TCTTTATTGC ACTAGCTAAC 000720 000721 TAGTGCAATG CCTGGTACAC CTAGTGACCG CTCTGTGTAT GTTTATTTAA CAATAGTTTT TATTTATTGA GGGCTCCTTA 000800 000801 TGTGCTTGGC ACTTTATATT TAGAAACTTT TAATTCTAAC TCTAACCTAT TACATAGGTA TTATTGGCTC CATTTTATAG 000880 000881 ATTAAAAAAA CTGAGGCTTG GAGGCTTAAG TAGCCTGCCT GTGTCACGCA GCTAGTAACT GGCCAGAGCC AGGATTTGAA 000960 000961 CTAGGTCTGC CCAACTCTAG AGTTTATGTT CTTCACACAG ACAATACCAT TAAGGCATGA CTGAAGCCGT GAATGGGCGC 001040 001041 TACCAGTAGA CAGATCCTGA GACCAAGATC ATTTGAATGG CCTTGGTTTC TAAAGGAGGG TGTGATATGG GACAGGCCGC 001120 001121 TGATTCAAGG AAGAGGGGCT CCTCTCCTCT TCCTTTGACT GTTTTGGGGT CTGTACCCAG ATCTCACCTC ATTCTTTCTG 001200 001201 TCCTTAAGGA GAGATGCCCA CTGGGACAAG GAAAGTGATG CCTTCCTTCA CCCACCCCTT CCCTTATGAA GATCTGCAAC 001280 001281 CTGTGGTTTC AAAGCCTTCG CCCAGCATTC TGAGGCCCCC ACCCCTGCAT CATCCATGAT GTGCCCTGTC TATTCTTTTT 001360 001361 TTTTTTT |
Predicted Small Protein
Name | ENST00000554532.2_smProtein_1076:1237 |
Length | 54 |
Molecular weight | 5503.4526 |
Aromaticity | 0.0 |
Instability index | 56.8396226415 |
Isoelectric point | 10.051940918 |
Runs | 8 |
Runs residual | 0.00931891394386 |
Runs probability | 0.0385532591415 |
Amino acid sequence | MALVSKGGCDMGQAADSRKRGSSPLPLTVLGSVPRSHLILSVLKERCPLGQGK |
Secondary structure | LEEEELLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLEEHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |