NONHSAT000102
Revision as of 19:11, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT000102 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
684 nt |
Genomic location |
chr1-:664669..674281 |
Exon number |
8 |
Exons |
664669..664885,665019..665184,665278..665335,667397..667459,667566..667587,668699..668715,672122..672150,674214..674281 |
Genome context |
|
Sequence |
000001 TTGCCACTAT GCCCAACTAA TATTTGGAAT TTTCGTATAC GTGGATTCCA GAGGGGTGAC AGCAAAACGT GGGAACATCC 000080
000081 AGTTGCAGGA AAACAAGCTT AACACGCCCA CTGAGGTCTC CCTCTGTTGT CCAAGGTGGG ACCATCCAGT TGCAGGAAAA 000160 000161 CAAGCTTAAC ACGCCCACTG ACTATGCCCA ACTAACATTT GGAATTTTCG TATACGTGGA TTCTAGAGGG GTGACAGCGA 000240 000241 AACGTGGGAC CATTCAGTTG CAGGAAAACA AGCTTAACAC GCCCACTAAT TCTACATTAT GCTCCTACCT CCCGGCAGCC 000320 000321 TCTCCAGGCC CAGAACTTTC TCCAGTCAGC CTCTACAGAC CAAGCTCATG ACTCACAATG GCCTATTTAG GCCCATACCC 000400 000401 TATGTCACGG CAGCCTCCGC AGATGAGGCT ACTGCCTCAC AACAGCCTCC ACAGGCACAG CTCCATCGTG GCCCCTCCAG 000480 000481 GCCCAGCCTC TGCCTCCCGT CAGCCTCTAC AGTCCCAAAG TCTGCCTCAC AGCAGATTCT TCACGCCCAG CATCTACCTC 000560 000561 ACTGTGGACC CCCCAAGCCA AGCTCCCAAC CTTTCAGCAG CTTCTACACA CCTAGCTCCT GCCACCCAGT GGCCTCTTTA 000640 000641 GGCCAAGCTC ATGCTTCACA AGGGCCTTTC CAGGCCCAAC TTTT |
Predicted Small Protein
Name | NONHSAT000102_smProtein_377:640 |
Length | 88 |
Molecular weight | 9488.723 |
Aromaticity | 0.0689655172414 |
Instability index | 82.1701149425 |
Isoelectric point | 10.8779907227 |
Runs | 9 |
Runs residual | 0.0348111658456 |
Runs probability | 0.0415415415416 |
Amino acid sequence | MAYLGPYPMSRQPPQMRLLPHNSLHRHSSIVAPPGPASASRQPLQSQSLPHSRFFTPSIY LTVDPPSQAPNLSAASTHLAPATQWPL |
Secondary structure | LLLLLLLLLLLLLLLLEELLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLEEE EEELLLLLLLLLLHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |