NONHSAT000582

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT000582

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

682 nt

Genomic location

chr1+:4531468..4543341

Exon number

5

Exons

4531468..4531549,4532390..4532512,4542197..4542494,4543003..4543098,4543259..4543341

Genome context

Sequence
000001 TACTGAAAAT ACAAAAACGA GCTGGGTGTG GTGGCACAGG CCTGTAATAC CAGCTACTTG GGAGGCTGAG GCAGGAGAAT 000080
000081 CGCTCATGAG CGTGGGCTCA GCTGGGTTGG GGGCTCAGCT GGGACAATCC CATATGACTT TTCATCCTTC TTCCTGGCCT 000160
000161 GGGGGTCTCA GGAAGCATTT CAAGAGGGCA AAGGTAGAAA TTGCACTGGA AACCAATGGG AGTTTACTTT TCAGTCATGT 000240
000241 GCCACCTGGG AACCAATGAG AGCTGTCTTC TCAGCCACAT GCCTTGTCTG GGGCCCATCT GGAGATGACT TTTCAGTCAC 000320
000321 ATGCCACCTC TGGGAGCCAC TGGGAGCCAA TGGGAGCTAA CTTCTCAGTC ACTTGCCACC TGGGAGCCAA TGGGAACTAT 000400
000401 CTTCTCAATC ATTTGCCACC TGTGGGGAAC ATTGGGAGGT GTCTTTTCAG TGATGTGCCA CCTCTGGGAG CCAATGATAA 000480
000481 CTGACTTCTC AGTGACATGT CCCTAGCAAG ACGCCAGCCT CGTGCTGGGG AGAAGACGGA GGGAGCTGGA GCCCAGCTGC 000560
000561 CCTCTGCCCA CTACTTCCCC TCAGCCGTTG CCCAGAAGGG GCCAAGTCTT GGAGCCGATG TGGCTGTAAG CCAAAGTGCA 000640
000641 GCAGAGTGTA AAACGCTGCC TCTCTCCAGT GGAGAGGGTC TC
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Predicted Small Protein

Name NONHSAT000582_smProtein_320:505
Length 62
Molecular weight 6700.7551
Aromaticity 0.114754098361
Instability index 48.831147541
Isoelectric point 4.38641357422
Runs 12
Runs residual 0.0439042773695
Runs probability 0.0893687805453
Amino acid sequence MPPLGATGSQWELTSQSLATWEPMGTIFSIICHLWGTLGGVFSVMCHLWEPMITDFSVTC
P
Secondary structure LLLLLLLLLEEEEELLLLEEELLLLEEEEEHHHHHHHLLLEEEEEEELLLLLEEEEEEEL
L
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
L
PiMo oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii
i