NONHSAT001433
Revision as of 19:17, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001433 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
686 nt |
Genomic location |
chr1-:22005692..22007745 |
Exon number |
2 |
Exons |
22005692..22005932,22007301..22007745 |
Genome context |
|
Sequence |
000001 aaagcatgtt atttagaaat aggctaaata ccagaagaag ctgctgtgtg agtcaaaagt gactccttcc agaacttggg 000080
000081 aatgggagga ggaaggggag agagacagct CCAGAGGAGT CAGTTACATG GCTTCCTCCC AGGCCACTCC TAGAGTCGTG 000160 000161 CACTAGGTGT GCCCTAgtta caaaccttgt cctgtcagta tttgactttt taaatgatgc atacgtattg ctttgataaa 000240 000241 aacagaaACA AAGATTGTTC TGAAATTAGT AACATCCGTA ACTTCAAAGA TGATTATTAC AGGTGACAAA GGTAATCAAA 000320 000321 AGTTATTTTA AACTTTTGTC TTTAAGCATT GAAATGATAT TACTGTCTGT CACGACAATC TTTTCAATTT GGAATTCTTC 000400 000401 TTTTTTTCTT TTTTTCAGTT TGTATGCCAG AAGAAGGGTT TAAAGGTACT GGTCTTCTTG GACATTAATC TTTGAATACT 000480 000481 TGCTGACTGC TAAGAAATGA CCAGAGGGGA AGAGGAGTTT GACATGTTAG GGCATTAAAG CAAAGGTGGA TTTAAGAATT 000560 000561 AAACCATTAC ATGCCCCTTC CAAAAGGCAG AAATCCATTC AAACGTGACT GTCCCAAATG CCTTATGTCA AATAAAGCAG 000640 000641 ATTGCACTGA TGGACATCAG ACTTGAAGGA AATGTTTCCA ATTTTA |
Predicted Small Protein
Name | NONHSAT001433_smProtein_353:442 |
Length | 30 |
Molecular weight | 3516.1605 |
Aromaticity | 0.241379310345 |
Instability index | 71.9344827586 |
Isoelectric point | 11.7113647461 |
Runs | 7 |
Runs residual | 0.0418103448276 |
Runs probability | 0.0390264213795 |
Amino acid sequence | MILLSVTTIFSIWNSSFFLFFSLYARRRV |
Secondary structure | LEEEELLEEEELLLLLHHHHHHHHHHHLL |
PRMN | LHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | i???????????????????????????? |