NONHSAT001749

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT001749

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1631 nt

Genomic location

chr1-:26144715..26146345

Exon number

1

Exons

26144715..26146345

Genome context

Sequence
000001 GGGAGCGCGG CCCCCGAGTG GGCGAGGCGC TGGCGGCTGT AGGCTCCGAT ACCGCGGAGC ACACTCCCCT CCATCGAGAC 000080
000081 CGTGCCCCCG CGGGGTCTGT GTCCCCGGGA GGAGTTGGCT GCGTTTGGAG ATCCCTCGGC CTGGTATTCG TCGCGTCTCC 000160
000161 CTGCTTGTTG CTCTCCACGT TTAGCCCCAT CCGACTTCTG GAAGCCCAGG GGTGTGTCGC TCGACCCCTA AAATATGCTC 000240
000241 CTACCCCTAG GGCAAACTTC AGAATCCTCA CCCTGGCCCC CTTCCCAGTT CTTGGTTCCC AGGCAGGTCC CTTTGCAAAG 000320
000321 CCTCTCTCCA GCAAGAATGC GCAGAATGGG CCTCTTTCTC CTCTTGACTC CTGCCCTCCA GCACTTTGCA GCTTTCTTCT 000400
000401 ATTTTAGCCT CTCTCTCTCT CTCTcacaca cacacacaca cacacacaca cacacacaca cacacacGGT ATATTCAATG 000480
000481 AGTTTGCTTA TTAGATGGGT ACTTGATGTA CAAGACTCCA GAGGCTCTGT GGGAAGAGCC ACATTCCTTC CAGGCTCACT 000560
000561 AACCCACTCC CTCTTTGTGC TCCAGCCCTC ACTGTCTTGG TCTGTGGCAT GCAGTTCCTG GGTCACATTT CCTTCTCTGC 000640
000641 CTTCAGCACA GCCTCGGGCT GTGCCTGGCT CCCAGGCTGG AGTTCCTTGG TTCCAAAGCC TGCAGTCCCC TCTGCCAGAG 000720
000721 Acagagctgg tttcatgggt gaacagccca tgcagtcaca acgggccgca tgctcagaat cctgtacttg gtttagtact 000800
000801 ttgctgttgc cgtcttgaaa tgattttcta ataggggttc ttgtgttttc attttgcacg gggctgtgca aattatgtga 000880
000881 ctggtcctgG CTAGAGACCT CAGAGGTCGT CCACCCTGAT CTCCACCATA TCTCAAACGC TGAAGATTGA CTTCCAGGTC 000960
000961 TGGCCCTCTT CCCAGGATGG CACATTGTGT TTTAATCATT ACCTTTCCCT CCTGTGCGAT GGCGGATCAT GCAAGTCCAC 001040
001041 GCTGGCTGTC TGTCCTGGGT GTAGATGCTG ATTTGGTGTC CCACTCAGAT CCCCTTGCAG GAAGAACgga gctccctacc 001120
001121 tgggaatttc cttcacctcc caagccaatg actgataaaa ggtccaaaag gccagttcag ctctgcagtg tggtttatgc 001200
001201 cccacagctc ttccactgtg ggtcaggcca aggctgggct gagactgttc ctgctcagca tttttccttt ccctcttctg 001280
001281 cttccttcct tcttttactg gtttttctgg aagtacactc ccccccagcc ccaccaaaca aacaaaacaa acaaacaaaa 001360
001361 aaacacttca tgcctgtctc aggctctgct tttaagACAA TGATTTTAAC TCCCAGATCT CTCTCAACAG AGAGCACCAG 001440
001441 ATTCTCAAAA CAGTAAGTCC TACCACTTGT TCTATCGTAA AACTTATTTT GGGCAAGTCA CTCAAGCCTT CGATAGGTAA 001520
001521 GATAGTACCT GAAAGCATTC CAGCTCAACT CTGCCCCAAG AGGGAGCCAC CCCATGGAAG GACGGAGCTG AGCAACATGC 001600
001601 CACTCAAAGG AAAAGCACTT AGAACCACTC T
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Predicted Small Protein

Name NONHSAT001749_smProtein_608:817
Length 70
Molecular weight 7410.407
Aromaticity 0.115942028986
Instability index 68.4449275362
Isoelectric point 7.75494384766
Runs 10
Runs residual 0.00559621179509
Runs probability 0.0344815403639
Amino acid sequence MQFLGHISFSAFSTASGCAWLPGWSSLVPKPAVPSARDRAGFMGEQPMQSQRAACSESCT
WFSTLLLPS
Secondary structure LEEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHLLLLLLLLHHHHHHHHLLLL
HHHHEELLL
PRMN -
PiMo -