NONHSAT002083
Revision as of 19:20, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002083 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
569 nt |
Genomic location |
chr1+:31460912..31461480 |
Exon number |
1 |
Exons |
31460912..31461480 |
Genome context |
|
Sequence |
000001 GTAATCCTAC TTTATACATT TTAAACATTA TTCTGAGAAG TAGTCCACAT GGTTCACTTA TTAAGAAGTT CACGGCACAC 000080
000081 ACAAAAACAA ACAAAAAAGA ATTAGAAACT CCTGCTCTTA TAAATAAACC TTACAAGGGT TAAATTCAGA GTGATTAACA 000160 000161 GTGACCAGAC AACCAACTGA CTCATCAAAA TCCCATGTCA CAGCTAACAA GAACTAAGTT TGCAATGAAT TAAATGAAAA 000240 000241 TTACCTTTTC CCTATTTGCA GGCTGCTCCA TGTCATGTAT CTCATTATAG GCTGATAATA AGTTTGATGA AACCAGCTTA 000320 000321 TTACACCAAA TCAAAGCCAA GATTGAAAGA AAATATAACA AAAGAGAGAA TTACTTATTT TGTCAACCTC CAAACCAGAT 000400 000401 TCCTATTCTA AAAAATCACA AATAAAGCAA ACCTACCATT TGCAGCAAAC TCTAAACCAA GAAAAATGAT CACCTTTGTT 000480 000481 GCTTATTTCA GAAAGCCAAG ATAAAAAGAG CAGAATGTGC AGAAAAGTAT GTGCTGCACT AGACCTCTGG TCCAACCCTC 000560 000561 ACAATCATC |
Predicted Small Protein
Name | NONHSAT002083_smProtein_233:289 |
Length | 19 |
Molecular weight | 1939.3857 |
Aromaticity | 0.111111111111 |
Instability index | 54.1055555556 |
Isoelectric point | 7.82183837891 |
Runs | 4 |
Runs residual | 0.0438596491228 |
Runs probability | 0.0194091149973 |
Amino acid sequence | MKITFSLFAGCSMSCISL |
Secondary structure | LEEEHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |