NONHSAT002879
Revision as of 19:24, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT002879 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
840 nt |
Genomic location |
chr1+:45079937..45092729 |
Exon number |
3 |
Exons |
45079937..45079969,45088414..45088459,45091969..45092729 |
Genome context |
|
Sequence |
000001 GGAACTGGAG CAGCTAGCCC AACTGCCCTC GAGCAAGAAT TCCCTTCTGA AGGATGCCAT GGCTCCAGGC ACCCCAAAGT 000080
000081 CCCTCCTGTT GTCTGCTTCC ATCAAGAGGG AAGGAGAGTC TCCAACGGCA TCACCCCACT CATCTGCCAC CGATGACCTC 000160 000161 CACCATTCAG ACAGATACCA GGTGAGGAGG GGTGGTGAGT GGCCATGAGA AGCAAGCTCA CCTGGGGGAG GGCTTCAAGA 000240 000241 GCCTGCCCGG TGCTAACTCC TCCTCTCCTC TGTAGGCCAC AGGAGAGGCC TGAACTGGGT TTGGTTCCCC CTGTGTCCCG 000320 000321 TGCCCCTAAG TGAACTCAGG AGGCATACGT GTCAGGGAAT AGGCCTTAAA TAGATGGATT TTAGGGAGAG ATGCCAAGGT 000400 000401 CACATGGGCT CCATGGGCTC TGAGCACCTC TGAATCATTC TATCCATCAG GAAGTATCCT ATGGGGTTTG GTTTCATAAG 000480 000481 AGACCCAGAT ACATAGCCCA GAATCACCTG AAGATTTCAG ACTTCAAAAG CATGATACCg gccgggtgca gtggctcatg 000560 000561 cctgtaatct cagcactttg ggaggccgag gcaggcagat cacgaggtca agagatcaag accatcctgg ccaacatggt 000640 000641 gagaccccat ctctgctgaa aatacaaaaa ttagctgggc atggtagcgt gtgcctgtag tcccagctac ttgggaggct 000720 000721 gaggcaggag aatcgcttga acccagaaga tggaggttgc agtgagccaa gattgcacca cggcactcca gcctggcgac 000800 000801 agagtgagac tccatctcaa aaaaaaaaaa aaaaaaaaaa |
Predicted Small Protein
Name | NONHSAT002879_smProtein_53:184 |
Length | 44 |
Molecular weight | 4865.5557 |
Aromaticity | 0.0232558139535 |
Instability index | 104.1 |
Isoelectric point | 8.94073486328 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.0397986221516 |
Amino acid sequence | MPWLQAPQSPSCCLLPSRGKESLQRHHPTHLPPMTSTIQTDTR |
Secondary structure | LLLLLLLLLLLEEELLLLLLHHHHLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |