NONHSAT003241
Revision as of 19:26, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003241 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
728 nt |
Genomic location |
chr1-:52811395..52820537 |
Exon number |
4 |
Exons |
52811395..52811875,52819190..52819319,52820280..52820370,52820512..52820537 |
Genome context |
|
Sequence |
000001 ATCAAGTTTG AGATCTTCCA CAAAGGGTCC TTCTTCAGAA GCGACAAGCT GGTTGGCACA GCACACCTGA AACTGGAGCG 000080
000081 GCTGGAGAAT GAGTGTGAGA TCAGAGAAAT TGTGGAGGTC CTGGATGGAA GGAAGCCCAC CGGGGGGAAG CTGGAGGTGA 000160 000161 AGGTGAGGCT GCGGGAGCCT CTGAGTGGCC AGGATGTGCA GATGGTCACT GAGAACTGGC TGGTTCTGGA GCCCAGGGGC 000240 000241 TTGTGAGAAT ATAAAAGATG AGTTCCATGA CAACGGGGCC CTCACTAAGC TGGCAGGCCC CTCCATGGAT CACCGGCACC 000320 000321 AAGGCGCTGT CCAGATCATT CATGTACTGC GAGGGAAGGG GCTGGCCATT GCTCCCTGCT TGATAGCCAA CCTATACCAC 000400 000401 AGAGAGAAAA GGAGGAGAGG TTACTGAACA GAGAAGGCCT CTCCAGGGCT GAGGGCAAGG AGGCTGAGCA GGAAAGGAGA 000480 000481 TGTCCTTTTT GGCCATAGGC TAAACATATG GCAGTGAATA CAAATTTATC CTCTTTTCTG GGTGATCACT TATCCTGTTG 000560 000561 TTTACTCCTC CTGAccactt gacaaccatg aggcactggg taagccactt aacctgttat ggtcttagtt ttctggggaa 000640 000641 gggtagaggt gtgtaaaaag gtatggagta tcagaaataa taccttaatc tttggttgtg aaaattaaaa tgagaaatac 000720 000721 acaatgta |
Predicted Small Protein
Name | NONHSAT003241_smProtein_257:382 |
Length | 42 |
Molecular weight | 4501.1921 |
Aromaticity | 0.121951219512 |
Instability index | 63.1707317073 |
Isoelectric point | 9.30194091797 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0423196305549 |
Amino acid sequence | MSSMTTGPSLSWQAPPWITGTKALSRSFMYCEGRGWPLLPA |
Secondary structure | LLLLLLLLLLLLLLLLLEELLHHHLLLEEEEELLLLLLLLL |
PRMN | - |
PiMo | - |