NONHSAT003241

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT003241

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

728 nt

Genomic location

chr1-:52811395..52820537

Exon number

4

Exons

52811395..52811875,52819190..52819319,52820280..52820370,52820512..52820537

Genome context

Sequence
000001 ATCAAGTTTG AGATCTTCCA CAAAGGGTCC TTCTTCAGAA GCGACAAGCT GGTTGGCACA GCACACCTGA AACTGGAGCG 000080
000081 GCTGGAGAAT GAGTGTGAGA TCAGAGAAAT TGTGGAGGTC CTGGATGGAA GGAAGCCCAC CGGGGGGAAG CTGGAGGTGA 000160
000161 AGGTGAGGCT GCGGGAGCCT CTGAGTGGCC AGGATGTGCA GATGGTCACT GAGAACTGGC TGGTTCTGGA GCCCAGGGGC 000240
000241 TTGTGAGAAT ATAAAAGATG AGTTCCATGA CAACGGGGCC CTCACTAAGC TGGCAGGCCC CTCCATGGAT CACCGGCACC 000320
000321 AAGGCGCTGT CCAGATCATT CATGTACTGC GAGGGAAGGG GCTGGCCATT GCTCCCTGCT TGATAGCCAA CCTATACCAC 000400
000401 AGAGAGAAAA GGAGGAGAGG TTACTGAACA GAGAAGGCCT CTCCAGGGCT GAGGGCAAGG AGGCTGAGCA GGAAAGGAGA 000480
000481 TGTCCTTTTT GGCCATAGGC TAAACATATG GCAGTGAATA CAAATTTATC CTCTTTTCTG GGTGATCACT TATCCTGTTG 000560
000561 TTTACTCCTC CTGAccactt gacaaccatg aggcactggg taagccactt aacctgttat ggtcttagtt ttctggggaa 000640
000641 gggtagaggt gtgtaaaaag gtatggagta tcagaaataa taccttaatc tttggttgtg aaaattaaaa tgagaaatac 000720
000721 acaatgta
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Predicted Small Protein

Name NONHSAT003241_smProtein_257:382
Length 42
Molecular weight 4501.1921
Aromaticity 0.121951219512
Instability index 63.1707317073
Isoelectric point 9.30194091797
Runs 7
Runs residual 0.00523716893611
Runs probability 0.0423196305549
Amino acid sequence MSSMTTGPSLSWQAPPWITGTKALSRSFMYCEGRGWPLLPA
Secondary structure LLLLLLLLLLLLLLLLLEELLHHHLLLEEEEELLLLLLLLL
PRMN -
PiMo -