NONHSAT003715
Revision as of 19:28, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003715 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
387 nt |
Genomic location |
chr1+:65407662..65408048 |
Exon number |
1 |
Exons |
65407662..65408048 |
Genome context |
|
Sequence |
000001 CTGACAAATA CAAGAACGAT CCAGAATTAT ATAAAAATCC AAAGAGAGAG AAACTACTCC TGGATGAACA TAATAACAAT 000080
000081 ATGCAAAGAT AAATTACCAA ATTAGAGGAA AAGATGATGT CTTATGAGAA ACATTTACAT TTGAATGATG AAATTCGATA 000160 000161 TATCTTGGAT GGAAGTAGGT ATTTTGACAT AAAAGATATA GAGGACACAT GGATCTGAAT TGCCAGGGAG AAAAAGATAT 000240 000241 ACATATACTT CGTGTGGGAA TTTATCATCA TTTCACTCTG GATGAAAAGT ACTATGCAGA GACAATCTGG CCCTTTGCTA 000320 000321 GATAACCGGT ATGAACCACT TTGATACTCA AGGACAATAC ATGACACTTT TGGCACAGGC AGCATAG |
Predicted Small Protein
Name | NONHSAT003715_smProtein_113:217 |
Length | 35 |
Molecular weight | 4260.7574 |
Aromaticity | 0.147058823529 |
Instability index | 43.0029411765 |
Isoelectric point | 4.68804931641 |
Runs | 8 |
Runs residual | 0.0491437081162 |
Runs probability | 0.0452548136372 |
Amino acid sequence | MMSYEKHLHLNDEIRYILDGSRYFDIKDIEDTWI |
Secondary structure | LLLHHHLLLLLHHHHHHHLLLLEEEHHHHHHLLL |
PRMN | - |
PiMo | - |