NONHSAT004274
Revision as of 19:31, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004274 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
584 nt |
Genomic location |
chr1+:87199927..87204378 |
Exon number |
3 |
Exons |
87199927..87200374,87200762..87200862,87204344..87204378 |
Genome context |
|
Sequence |
000001 CTGGTCATCT TAAAATTTTG TAAAATAGTA AAATTTAGCA AAATTGATAC TAGAAAATTT ATGAAAATAT CTTGGCTTTC 000080
000081 TCTTAGTAGT TTTTGTAGGC TCTTAAGAGT GTATCATTAA GCTTTAGCGT AACAGATTCT TTTCAATCAA GTACTGGAAT 000160 000161 CAGTTGTCCA GGTGGAGTAA TACAGAAAAG CTAAGGTCTA GAAACCAGGG GACCATTTTA GATACAAAGC AGAATTGCGG 000240 000241 AATTGCCAGA TTATAACTTG AGGTTTGTTC GGGGGATTTT TTTTAACCAT CTAAAATAAA TGTATATAAG ATGGACTGAG 000320 000321 TCTTCTAAAG AGATTCTAAA ACTATATTCT TACTTAAGTC TGAACAGGAA TTAAGAATAA CTCAAAGTGA ATTTGATCGT 000400 000401 CAAGCAGAGA TTACCAGACT TCTGCTAGAG GGAATCAGCA GTACACATGC CCATCACCTT CGCTGTCTGA ATGACTTTGT 000480 000481 AGAAGCCCAG ATGACTTACT ATGCACAGTG TTACCAGTAT ATGTTGGACC TCCAGAAACA ACTGGGAAGa gacagagttt 000560 000561 cactcttcca gtccaaggtg gagt |
Predicted Small Protein
Name | NONHSAT004274_smProtein_299:373 |
Length | 25 |
Molecular weight | 3008.4487 |
Aromaticity | 0.166666666667 |
Instability index | 75.2458333333 |
Isoelectric point | 9.39739990234 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0183006535948 |
Amino acid sequence | MYIRWTESSKEILKLYSYLSLNRN |
Secondary structure | LEEEELLLHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |