NONHSAT004594

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT004594

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1271 nt

Genomic location

chr1+:95007516..95008786

Exon number

1

Exons

95007516..95008786

Genome context

Sequence
000001 GGATGACTCA CCCCAGTGAT TCAACCGCGC CACCGAGCGC GGAGCTGCCC TGGAGGACGC AGGCGGGTCT AGTTGCCCGG 000080
000081 GTCCCCCAAG GCCCCCGGAT TCACCCAGGC CCGCGACTCC GACGTGCAGC TTAGGTGGGT TGCAGGTCTA TGGCAGGAAA 000160
000161 GGGAGGGCGC CTTGGAAGAA TTCTTCCCTT CCATTTGGTG ATAAAGTGGG AGAGGCGGCA TTTACAACAT TTAATAGAAA 000240
000241 GCACGGGCTC TGGGCTCCCC TCGGGCAGCG GAGGGCATTT CCCGGATGCT TTGCCCACCT GGGGCAGAAG CTCGGGACCT 000320
000321 GCAGCGAAGT AAACGTGTGG CTGTGAGCAG GGCCCTCTCC CAGCCACGGT GGCTTCTTCT ACCCCACGAA GGTCAAGAAT 000400
000401 ACCTGGCCTG CCCACCTCGC GGGGCCCTTA GCGGGTCGCA CAGGAGAAAG GCGGTGGGAA TGCCGGTGTC AGCCACGGTG 000480
000481 TGACCGGCTC GGCTCACAGG TCTGAGGGTC AGTTGGCTCA GGCATCGCCC GGTACGACCA GAGATAGTGA CTGAGGAAGA 000560
000561 GCAGCCTCAC ATCTGGCAGT TTGCCTCTGG GAGAATTCCA GCGTGACATC TGCAGCTCTG TGGTTCCAGA AAGGATGGTT 000640
000641 CCCACATTGA AGAAGACATC TGTGGGACTG AGTTCCACCG AAATGCAGAG GAACCAAAAA TGAAAATGAA AAATGTAACC 000720
000721 AGAGTTGTGT GCCACTAGTT TTAAGCTTTG GTTTTTCTAA ATTATTTTCT GGCTTCTCCT TCTGGGCTTT GCTGTAAACT 000800
000801 TGCCAAGCAT GAGAACAACT CTTCATCTAT TGAGTGGCAT TTTAAGCCAT CCTGTCAAAG TATCTCCTGT CATTTTTATT 000880
000881 ATTATTACTC TATATTGCCT GCAAGACACG ACTGGAGAAT TCTTAGTGTA AGAATTGTTT GTTTCCTCTC TCCTTCTTTC 000960
000961 CCACGTTTTC CCAGGGAAGT CAGTCTTGCA TTTTAATGCA TACTATATAC ATATCTCGTT TAGCTTACTG AACCACTTGT 001040
001041 TTTAACAGAA TAAAACTGTG CAAAATTTTA ATTTTCCTCC TTTGCCTGAA CTGAAATAGC ACATCCAGGT TTAGCCCTTG 001120
001121 TAGACTTTCC TTCCTCGAAG CAGAAAGTTG CCCTTGATGA TTTCCTCTTT GAGCTCTCTG CCAGCTCTGA AACCCACAAA 001200
001201 ATTTATGTTT GCAAAACTAA GCCATGCAAT CCTCTTTTTA TGCAGGCTCT AGCCTGAGTC ATTTTCCCTA A
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Predicted Small Protein

Name NONHSAT004594_smProtein_149:331
Length 61
Molecular weight 6384.2564
Aromaticity 0.0666666666667
Instability index 68.0616666667
Isoelectric point 11.4515991211
Runs 6
Runs residual 0.0497340425532
Runs probability 0.0494170641229
Amino acid sequence MAGKGGRLGRILPFHLVIKWERRHLQHLIESTGSGLPSGSGGHFPDALPTWGRSSGPAAK
Secondary structure LLLLLLLEEEELLEEEEEEHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -