NONHSAT004953
Revision as of 19:34, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004953 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
574 nt |
Genomic location |
chr1+:107685698..107690922 |
Exon number |
2 |
Exons |
107685698..107686039,107690691..107690922 |
Genome context |
|
Sequence |
000001 TTTTCTGGAT GCCGTGAAAT GAGATATATT TCACCCACTG AAGACCACCA TGAAGGCATT CAGGATTCTA TATACTGCAC 000080
000081 TACTAATTTG GTGGTATTTC CTTACTGTGG AATTTAAGAC GGATAATCTT AAAACTTTTG CATGGAAACA GTTTATTTGA 000160 000161 ACATAAAGCT GGTTTCCTGT TAATATTTTT GTTTTGTCAG TTTTCAATGG GTATATGTGT TAAAATGATT CAGGTTAGCC 000240 000241 TTTTTAGGAG GAGGCAAATG TATTTTGCAG TTTCCTTTTG TATATTTGCA AGTGGTGCAA ATACCTATTT TTGCTTCCAT 000320 000321 TATTATTCTG AAAAATATTC AGGGTGTTGG TGCCAGAAGA AAAGAATGAT TGATGGGAAA CAGACACCGG GCTATAGACA 000400 000401 CTCATCCTTT TGCTTCAGAT ACTGATATCT CAGCCTGCTT GAGCATCCCT TGTGAGCTGT GAACATTGAG GATCACTCAG 000480 000481 GGTTATCGGA TGTACAACGG GAGAGCCATC GCTTTGCTAA ATTATTATCT GCAATTGGAC ATCTTTTACA AAAACCAAAC 000560 000561 TAGACCTGAG TCTA |
Predicted Small Protein
Name | NONHSAT004953_smProtein_206:424 |
Length | 73 |
Molecular weight | 8661.0798 |
Aromaticity | 0.222222222222 |
Instability index | 50.3722222222 |
Isoelectric point | 9.57037353516 |
Runs | 13 |
Runs residual | 0.0396390916464 |
Runs probability | 0.0527971410324 |
Amino acid sequence | MGICVKMIQVSLFRRRQMYFAVSFCIFASGANTYFCFHYYSEKYSGCWCQKKRMIDGKQT PGYRHSSFCFRY |
Secondary structure | LLEEEEEEEEHHHHHHHHEEEEEEEEEELLLLEEEEEEEELLLLLLEEEEEEEEELLLLL LLEEELLEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooooo oooooooooooo |