NONHSAT004953

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT004953

Source

NONCODE4.0

Same with

,

Classification

sense

Length

574 nt

Genomic location

chr1+:107685698..107690922

Exon number

2

Exons

107685698..107686039,107690691..107690922

Genome context

Sequence
000001 TTTTCTGGAT GCCGTGAAAT GAGATATATT TCACCCACTG AAGACCACCA TGAAGGCATT CAGGATTCTA TATACTGCAC 000080
000081 TACTAATTTG GTGGTATTTC CTTACTGTGG AATTTAAGAC GGATAATCTT AAAACTTTTG CATGGAAACA GTTTATTTGA 000160
000161 ACATAAAGCT GGTTTCCTGT TAATATTTTT GTTTTGTCAG TTTTCAATGG GTATATGTGT TAAAATGATT CAGGTTAGCC 000240
000241 TTTTTAGGAG GAGGCAAATG TATTTTGCAG TTTCCTTTTG TATATTTGCA AGTGGTGCAA ATACCTATTT TTGCTTCCAT 000320
000321 TATTATTCTG AAAAATATTC AGGGTGTTGG TGCCAGAAGA AAAGAATGAT TGATGGGAAA CAGACACCGG GCTATAGACA 000400
000401 CTCATCCTTT TGCTTCAGAT ACTGATATCT CAGCCTGCTT GAGCATCCCT TGTGAGCTGT GAACATTGAG GATCACTCAG 000480
000481 GGTTATCGGA TGTACAACGG GAGAGCCATC GCTTTGCTAA ATTATTATCT GCAATTGGAC ATCTTTTACA AAAACCAAAC 000560
000561 TAGACCTGAG TCTA
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Predicted Small Protein

Name NONHSAT004953_smProtein_206:424
Length 73
Molecular weight 8661.0798
Aromaticity 0.222222222222
Instability index 50.3722222222
Isoelectric point 9.57037353516
Runs 13
Runs residual 0.0396390916464
Runs probability 0.0527971410324
Amino acid sequence MGICVKMIQVSLFRRRQMYFAVSFCIFASGANTYFCFHYYSEKYSGCWCQKKRMIDGKQT
PGYRHSSFCFRY
Secondary structure LLEEEEEEEEHHHHHHHHEEEEEEEEEELLLLEEEEEEEELLLLLLEEEEEEEEELLLLL
LLEEELLEEEEL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooooo
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