NONHSAT005027

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT005027

Source

NONCODE4.0

Same with

,

Classification

sense

Length

615 nt

Genomic location

chr1-:109897107..109935979

Exon number

5

Exons

109897107..109897153,109897989..109898091,109910030..109910103,109912152..109912211,109935649..109935979

Genome context

Sequence
000001 AAACTTATGA TGAATAAAGC CAGGAACTCT TGCTTATTTT CTGTCCTCCC TCTGCTCCTG TCACTAACTA CTTCTGTAAA 000080
000081 CATAACTTCC CAACTTCTAC TCCAACTTTA AAGCATCTGG TTCCTTAAAT AAACAGGCCC TGTAGAGAGG CCGTGTTGTA 000160
000161 TGGGGTGTCA GCTCTGGGAA GAATGCGTGT GTTTGTTTGC TGGCTCTGGC AGGGTTGAGT CCAAGCTGAC AGGACTGAGT 000240
000241 GTGCCTGTCA GAGGCTTCAG GGAGCTGCCG CTGAAGACCT CGGCCTGTTG TTGTGAATCG CCAGACCTTT GTAACACCCG 000320
000321 GAAGTCTGAA GCATGTGTTT GATGATCTCA GAGGCTCAGT ATCCTTGTCC TGGGTTGGAG ATAGCACTGG GGTCATTCTA 000400
000401 GTCTTGACTA CCTTCCATGT ACCACTGGTA ATTATGACTT TTGGACAGTC CAAGCTATAT CGAAGTGAGG ATTATGGGAA 000480
000481 GAACTTTAAG GATATTACAG ATCTCATCAA TAACACCTTT ATTCGGACTG AATTTGGCAT GGCTATTGGT CCTGAGAACT 000560
000561 CTGGAAAGGT GGTGTTAACA GCAGAGGTGT CTGGAGGAAG TCGTGGAGGA AGAAT
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Predicted Small Protein

Name NONHSAT005027_smProtein_473:577
Length 35
Molecular weight 3984.8206
Aromaticity 0.0882352941176
Instability index 62.4294117647
Isoelectric point 11.524597168
Runs 6
Runs residual 0.00967982129561
Runs probability 0.00984808337749
Amino acid sequence MGRTLRILQISSITPLFGLNLAWLLVLRTLERWC
Secondary structure LLLEEHHHHHHLLLHHHHHHHHHHHHHHHHHHHL
PRMN -
PiMo -