NONHSAT005027
Revision as of 19:34, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005027 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
615 nt |
Genomic location |
chr1-:109897107..109935979 |
Exon number |
5 |
Exons |
109897107..109897153,109897989..109898091,109910030..109910103,109912152..109912211,109935649..109935979 |
Genome context |
|
Sequence |
000001 AAACTTATGA TGAATAAAGC CAGGAACTCT TGCTTATTTT CTGTCCTCCC TCTGCTCCTG TCACTAACTA CTTCTGTAAA 000080
000081 CATAACTTCC CAACTTCTAC TCCAACTTTA AAGCATCTGG TTCCTTAAAT AAACAGGCCC TGTAGAGAGG CCGTGTTGTA 000160 000161 TGGGGTGTCA GCTCTGGGAA GAATGCGTGT GTTTGTTTGC TGGCTCTGGC AGGGTTGAGT CCAAGCTGAC AGGACTGAGT 000240 000241 GTGCCTGTCA GAGGCTTCAG GGAGCTGCCG CTGAAGACCT CGGCCTGTTG TTGTGAATCG CCAGACCTTT GTAACACCCG 000320 000321 GAAGTCTGAA GCATGTGTTT GATGATCTCA GAGGCTCAGT ATCCTTGTCC TGGGTTGGAG ATAGCACTGG GGTCATTCTA 000400 000401 GTCTTGACTA CCTTCCATGT ACCACTGGTA ATTATGACTT TTGGACAGTC CAAGCTATAT CGAAGTGAGG ATTATGGGAA 000480 000481 GAACTTTAAG GATATTACAG ATCTCATCAA TAACACCTTT ATTCGGACTG AATTTGGCAT GGCTATTGGT CCTGAGAACT 000560 000561 CTGGAAAGGT GGTGTTAACA GCAGAGGTGT CTGGAGGAAG TCGTGGAGGA AGAAT |
Predicted Small Protein
Name | NONHSAT005027_smProtein_473:577 |
Length | 35 |
Molecular weight | 3984.8206 |
Aromaticity | 0.0882352941176 |
Instability index | 62.4294117647 |
Isoelectric point | 11.524597168 |
Runs | 6 |
Runs residual | 0.00967982129561 |
Runs probability | 0.00984808337749 |
Amino acid sequence | MGRTLRILQISSITPLFGLNLAWLLVLRTLERWC |
Secondary structure | LLLEEHHHHHHLLLHHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |