NONHSAT005149

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT005149

Source

NONCODE4.0

Same with

,

Classification

sense

Length

917 nt

Genomic location

chr1+:111436931..111442473

Exon number

3

Exons

111436931..111437023,111437582..111437677,111441746..111442473

Genome context

Sequence
000001 GTATCTGCTT TGTCCCAGTT CTTCATCCTG CTGCTGATTA TCCTCCTTGC TGAGGTGACC TTGGCCATCC TGCTCTTTGT 000080
000081 ATATGAACAG AAGCTGAATG AGTATGTGGC TAAGGGTCTG ACCGACAGCA TCCACCGTTA CCACTCAGAC AATAGCACCA 000160
000161 AGGCAGCGTG GGACTCCATC CAGTCATTTG TGTTGGGGAT GTCCTTTGCA CTGACCCTGA ACTGCCAGAT TGACAAAACC 000240
000241 AGCCAGACCA TAGGGCTATG ATCTGCAGTA GTCCTGTGGT GAAGAGACTT GTTTCATCTC CGGAAATGCA AAACCATTTA 000320
000321 TAGCATGAAG CCCTACATGA TCACTGCAGG ATGATCCTCC TCCCATCCTT TCCCTTTTTA GGTCCCTGTC TTATACAACC 000400
000401 AGAGAAGTGG GTGTTGGCCA GGCACATCCC ATCTCAGGCA GCAAGACAAT CTTTCACTCA CTGACGGCAG CAGCCATGTC 000480
000481 TCTCAAAGTG GTGAAACTAA TATCTGAGCA TCTTTTAGAC AAGAGAGGCA AAGACAAACT GGATTTAATG GCCCAACATC 000560
000561 AAAGGGTGAA CCCAGGATAT GAATTTTTGC ATCTTCCCAT TGTCGAATTA GTCTCCAGCC TCTAAATAAT GCCCAGTCTT 000640
000641 CTCCCCAAAG TCAAGCAAGA GACTAGTTGA AGGGAGTTCT GGGGCCAGGC TCACTGGACC ATTGTCACAA CCCTCTGTTT 000720
000721 CTCTTTGACT AAGTGCCCTG GCTACAGGAA TTACACAGTT CTCTTTCTCC AAAGGGCAAG ATCTCATTTC AATTTCTTTA 000800
000801 TTAGAGGGCC TTATTGATGT GTTCTAAGTC TTTCCAGAAA AAAACTATCC AGTGATTTAT ATCCTGATTT CAACCAGTCA 000880
000881 CTTAGCTGAT AATCACAGTA AGAAGACTTC TGGTATT
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Predicted Small Protein

Name NONHSAT005149_smProtein_350:463
Length 38
Molecular weight 4230.998
Aromaticity 0.108108108108
Instability index 90.327027027
Isoelectric point 9.49700927734
Runs 7
Runs residual 0.009422266303
Runs probability 0.0378782143488
Amino acid sequence MILLPSFPFLGPCLIQPEKWVLARHIPSQAARQSFTH
Secondary structure LEELLLLLLLLLLLLLLHHHHHHHLLHHHHHHHHLLL
PRMN -
PiMo -