NONHSAT005193

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT005193

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

933 nt

Genomic location

chr1-:112043132..112045709

Exon number

2

Exons

112043132..112043981,112045627..112045709

Genome context

Sequence
000001 CTGCTTATCT TTACCCACGC CTCCATCATG TCCTTGCTGG CCATCGCTGT GGACCGATAC TTGCGGGTCA AGCTTACCGT 000080
000081 CAGGCTGCTG TCAGGAAGGA CAGTTTAAGG AGCAATGGGG ACTCTTACTC TTACTGTCCT TTAAGGTCTC TGAAACACTT 000160
000161 CAATACAATT TTGTAACTTC ATTGATTCAT TTAACTCAAA TACCAAGTAT GGATGCCCAT GAAGATAGAG AAGCAGGAGC 000240
000241 AGGCACAGGT AGAGGGGAAG TGTCGGGGAG GCATAGTATA ATTTATGAGA ATCTGCACAA CAGCCAAACA GAACAGTGCC 000320
000321 AAGAACAGCA GGCAAGCTTG CTTTGAGAAT ATCATTTCTC ACCAGGCAGA CAATCCTAGG AGACTTAGAT GAATCTCAGC 000400
000401 TCCCAGGAAC TGAATAATTC TTAGGCTTAC ACCTTATTGG GAACAGAAGG AGTAAACTGA GTTCAAGGGG GACTTAAACT 000480
000481 GCTGAATTCA CCTGTGGATG TTTTTGAGTT AAAAAAAAAA AGAAAAAGAA AAGATAGGTA ACAGTTGTAT AGCTCTCAGT 000560
000561 AAGTGGAGCC CTGAGTGGAG CACGTAAGCA CTTGACTCTA GGCAACATCC TCCTTATCCA TTCAAGAGTT TTCTTCTTTA 000640
000641 GAAAAGTCCC CAGAGAAGTT TCCTGGATTT TTCTCCAATC GTTGTCTGCT CATCTTGTCT TCGTATCCAG TGGAGTTTAG 000720
000721 CTGGAATCAC CATAGGATAT CAATGCTGCC CTCTCTTAGC AGAAGATTGG AGAATTAAGA GAGTATATGC CTTATCTCAC 000800
000801 CTCTCTCTCT CTCCTTTACC AGCTCCATCT CCCCTACCCT TTAGCAATTA CTGCTGTGGA CTCACTGACT CTCTTCATTC 000880
000881 ACACAGATAC AAGAGGGTCA CCACTCACAG AAGAATATGG CTGGCCCTGG GCC
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Predicted Small Protein

Name NONHSAT005193_smProtein_284:391
Length 36
Molecular weight 4059.5796
Aromaticity 0.0285714285714
Instability index 76.2085714286
Isoelectric point 10.8065795898
Runs 5
Runs residual 0.0382566585956
Runs probability 0.0300830242007
Amino acid sequence MRICTTAKQNSAKNSRQACFENIISHQADNPRRLR
Secondary structure LEEEELLLLLLHHHHHHHHHHHHHHHHLLLLLLLL
PRMN -
PiMo -