NONHSAT005366
Revision as of 19:36, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005366 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
673 nt |
Genomic location |
chr1-:115168319..115213043 |
Exon number |
2 |
Exons |
115168319..115168809,115212862..115213043 |
Genome context |
|
Sequence |
000001 CCAGGCTTTA TCTTGTTGAG TAGTTGTGAA GAGTAAACCT TCACATGAAG CATAGGGCCG TCTCCGTGGG GCCGATGCGA 000080
000081 CGGCAGGCGA AGGCGATGGA GCTCTGGCTC GAGGGCTTGG CCGGACGACG GTGACACTGG TCGCCCGCCT GCTGGAACTG 000160 000161 CAGTGACCGA GGTCCTGGCA AGGATTATTC AAGATCAGGT TGTAGCCATT TTCAACAAGG ATCACTGATC AAAATTTTCT 000240 000241 TTTTACAAAG AGATTTACAA GTTAAACATG AAGGGAAAAT ACTGGAATCA TTTGGATTCT GACAGGATAA AGAATACAAT 000320 000321 ATTTCACATT TACTTGTAAT GGAACCTTTG TAAGATTCAT CACTTGTCAT TCACCCAGTT GGGAACATGG ATGTTGGTTT 000400 000401 TTCTCGTACT ACTGTTCAGA CACTGTCAAG AAGCCACTGC AAAAACATCA AACAAAAAAT TTCTCAATGG GAAGGAAGGG 000480 000481 CTAATGGTAT ATCTAATCCA GAAAAGTGGT GTCCAAAGGA CTTTGGAGTG AGATATAACT GTCACCAAGA GATCCGTCTT 000560 000561 AAGAAAAATC CTATAGCTGA GAGAAAGAGC AAAAACTTGG ATGTAACCAG CCGTGAAAAT GTGGGTCTAG ATATAAATGA 000640 000641 AAATACCAAA AGCCATGATC AAAGTGAGAA TGA |
Predicted Small Protein
Name | NONHSAT005366_smProtein_44:133 |
Length | 30 |
Molecular weight | 3335.9756 |
Aromaticity | 0.0344827586207 |
Instability index | 60.0931034483 |
Isoelectric point | 11.8342895508 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.00614732379438 |
Amino acid sequence | MKHRAVSVGPMRRQAKAMELWLEGLAGRR |
Secondary structure | LLLEEELLLHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |