NONHSAT006131
Revision as of 19:39, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006131 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
580 nt |
Genomic location |
chr1+:148555935..148558310 |
Exon number |
3 |
Exons |
148555935..148556272,148556692..148556810,148558188..148558310 |
Genome context |
|
Sequence |
000001 GCCGCAGAGG CGGCCATGTA CCTTTAAGGC CCCGCTGCGC CTGCGCCTTG GGCTCTCCTG ACGCGCCGGG CGGGACCCTG 000080
000081 AGGAGCCAGC TGGCGCAGGC TATGGGCTGG GCGGCGGTTG AGACAGCGGC GGTATCGGGA GGGGTAGGTG AGGGTCGCGA 000160 000161 GGCTGCGTGA GCATCTGAGT GAACGCGGTG CTTTTGGGAA CGCGGGACGG GCGACCTGTG GCGCCAGGAG CGGGCCGAGG 000240 000241 CGTGGCGCAC GGATGCCGTC TGGATGGGAA GTTACGGTTT ACAGCGAAGT CCACCCAGCG TTTCCGAGGT GAAGGCGCCG 000320 000321 CGCCAGGCCG GGCGGGCGGC TGGTGATGGG CAAGCCGGGT GTACCAAGTC CAGGATGCAC ATGAGGAGCG TTTGTAGCAG 000400 000401 TCACTGAATC ACCTCATGAC TAGCGGGGCA GGCCTCTAAT TCACCGCAGG ATTTCCGgct ggagtgcagt ggcacaatca 000480 000481 cagctgaccg caaccttgac ctcccaaggc tcaggtgatc ctcctgcctc agcccccaag tagctgggac ctacaggtga 000560 000561 gcaccaccac actcagctct |
Predicted Small Protein
Name | NONHSAT006131_smProtein_263:406 |
Length | 48 |
Molecular weight | 4918.5188 |
Aromaticity | 0.0212765957447 |
Instability index | 86.9510638298 |
Isoelectric point | 10.2998657227 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.0497360105203 |
Amino acid sequence | MGSYGLQRSPPSVSEVKAPRQAGRAAGDGQAGCTKSRMHMRSVCSSH |
Secondary structure | LLLLLLLLLLLLHHHLLLHHHHHHLLLLLLLLLEELLEEEEEEELLL |
PRMN | - |
PiMo | - |