NONHSAT006300
Revision as of 19:40, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006300 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
7908 nt |
Genomic location |
chr1+:150487429..150495336 |
Exon number |
1 |
Exons |
150487429..150495336 |
Genome context |
|
Sequence |
000001 gagactgtgc ctcaaaaata aaataaaata aaataaTGTC TAGTCGGAGA GCCGGGGAGG TGGCGCGCGC CTGTAATCCC 000080
000081 AGCCACCCAA Agagctatgg tctcggcact gcacttcaac ctgcgagacc cagtctcaaa aagaaaaaaa aaaGTTTAGT 000160 000161 CGGCAGCCAG CAAGGCGGGA CGCTGGGAGG CCAGTTCAAA GAGTGTCGTC CCAAGTGCCG GAGGGACGGA GCTGTAGCCC 000240 000241 CCAACCTGAG CTGGACCCGA GGGTGGCGGT GACTAGGACT CTCAAGCCCT ACAAAGCTGC TCCCAGGAAC CCGAGGCCTC 000320 000321 AAGGCTGGAT CTGAAAGAAT CGGAATGAAG ACTCGGAATG AAGAGTCCCA GGGGAACAAG TCCTGTGTGA CTCCGCCGCC 000400 000401 AGGACGACCT TCCAGAAAGC AGACTTCTCC GCTCCAGTTC TAGCGGAGAC GGAGAGAGTG AACCAAGAAC CATCATCCTG 000480 000481 CGCCAGCCAG GGGCAAGCGG AGCCTCAGTT GCTCCCAAAC CCACGCCCGC CTCTCCTTCC TCTCCTCCTC CACAGGCTTT 000560 000561 CATTTATTTA CTTAAGTATT TTTAGCCCAG TAGCAGTTTC CAGTCCAGCG GCTCCTCAGA TCTTTCGCCG GCTGTCCGCC 000640 000641 CCACCTGTCC GTCAGCACGC GAGCCAATGA GCGGGCGAGG GCAGCGCTGT GCCCCGCCCC TGAGCCGGCA GCCCAGTCTC 000720 000721 GGGAGCCCGG GGCCGCCTGG GCCTCCTGCC CGCCGCGCTC GAGTCTGGAG CTCGAGAGTG ACACTGCGCA TGTGCGGGCG 000800 000801 TCCTGCGCAT CTCCTACGGC CTCCAGGACA GAGGAACCGG GGGAGGCAGG GGGAAAAGGC CGGCCCAGCA ATTCCCCTAC 000880 000881 CCCCCGGTCC CACGTGTACC CTCCTGGCCT GGGTCGCCCC AGCCCACGGG GAGCGGGCGG AGTCCTGGCC CACGAAGCCT 000960 000961 TGTCACCTGG CGGGCGAATC CGCAAGCGGA GACTTGTCTT TAAAGGGCTT TGggccgggc gcggtggctc atgcctggaa 001040 001041 tcccagcact ttgggaggcc gaggcggtgg atcacgaggt caggagttca agaccagcct ggccaagaag gtgaaacccc 001120 001121 gtctgtacta aaaatacaaa aaaaaaaaaa aattagcagg gcgtggtggc gggcgcctat aatcccagct actcgggagg 001200 001201 ctgaggcaga gaattgcttg aacccgggag gcggaggctg cagtaagatc gcgccaccgc actccagcct gggcgagaga 001280 001281 ggagactctg tctcaaaaaa aaaaaGGGAG CGGGGGGGCT TTGGTCTGTG CAGGAGCTTC CCGGAGATGC TTTAGAGCTG 001360 001361 CGTTTGCAAA GTGCAGCGCC AAATGCTGCA GAGAGGTGGG AGTCAGAGGA GAGGAGGACT GCGGTCCCAA ACCCTAGCAG 001440 001441 TTTAGTCTGT CGGGGAGGAG AGGAAGGGAA CCCGGAGAGC ACTTGTAAGC TACAGTGCTG AATATGAGGA GGTACTGAAT 001520 001521 TGAGCATCAA ATGCTGAGAG TTAAAGAATT CTCCCTAGGG ACCAGCCAGC TATTATCTGG AAGCAGTGAG TTTGGATAGA 001600 001601 GCCTGGAAGC ACGGGTAGCA TTGCTGTTAG CAATAAAAGG TGAACGTGTT AACATTCACT GCAATTCGTT GTATACACTA 001680 001681 TTAAAATATA ACTTGCTCAA TTCAGGGGCG GTGAGTAAAG TAAAGGAGTC AGAGCTCCTA ATTATTGGAG AGGCCAGGGA 001760 001761 AAGCTTCACA GAATTCAAGC TTGAGTAGGG TTTTGTTGAA AGGGAAGGAT ATACAAAGCA TTGAATGTAT GCAAAGTTCA 001840 001841 GCTAAAGTAA ACAGTCCTTT TTGTGTTAGG CAGAGTGCTA AAAGTACTCT GGCTATAACG AAGACTACAA CACCACCTTC 001920 001921 AGGGACTTTA GCGTCTGTGG AGACTTGAAC ATCTAATGTT AGAAATATTC TCAGAATTCT GAGACAGCCA CCTAGCCTGG 002000 002001 CCTTCAGGGA GATCTTCCAG GAAGAGGAAA TAACACAGAA AGTGTGGTAT ATTTAAATAT ACCTAgccag gcgcggtggc 002080 002081 tcacacctgt aatcccagca ctttgggagg tcgaggccag tggatcaacc gaggtcagga gttcgagacc agcctgacca 002160 002161 acatggtgaa agccgtccct actaaaaata caaaattagc caggcatgat ggcgcatgcc tctaatccca gctacttggg 002240 002241 aggctgaggc agaagaattg cttgaaccca ggaggcagag gttgtagtga gccaagattg tgccattgca ctccagcctg 002320 002321 ggtgacagag ccagactccg tctcaaaaaa aaaaaaaaaa aaaaGGTTGA GGGCATGGTG AGGGAGGGGA CTTTTTTTAA 002400 002401 AAGCTCTTCA ggagataggg ttgagagaac ctgtttgctg gtgtctaggg tgactaccaa gtttgaggct gtggtaacta 002480 002481 aggtaagtgt tacagactga atgtttgtgt acccccaaat gcatttgttg aaatcctagc ccccagtgtg atggtattag 002560 002561 gaggtggggc ctttgggagg taattaggtc atgagggtgg agccctcata aatgggatta gtgctcttat aaaagggacc 002640 002641 ccagagagtt ctctagctct tcctgccctg tgagatacaa gaagttggca ggctgcaacc tggcagaggg ccctcacctg 002720 002721 agcctgacca tgctggcaca tgatctagga cttctagcct ccagaactgt gagaaataca tttctgctgt ttaacccacc 002800 002801 ctgtctatgg tacttcacag ctcatactga ctaaggcagc agaacataca ggaggaagag gagcaggttt cacagaggga 002880 002881 agacatgagt tcaattttgg acTTCTCAGT AGTCGGTGTC CTCAGTGGTA GCAACTTCAA ACGGAAGGTG TCAAAAGTCA 002960 002961 AATTCTGGAG AGTTGAGTAT GAATGGGAGA TGAAGAAAAG GAGGCAGCAC TTGTAGCCTG CTCTTAATGT ATTTCTGCAC 003040 003041 TCTACACTAG CAGCCTATTA CACAGGAcac ttggatgtct cctagatatc acaaattcag cttcaaaaat gaattcttCT 003120 003121 AGGTATATGG AAAGatgtga agaagaaaat atagcaataa gttaggtggt aggtatatgg ttgtttactg tacaatctgt 003200 003201 cagtttttct gtatttttga aatttttcat gataaaatat taagaaaaAA GTAGTGGGCC CATCCtcttt accctccaac 003280 003281 tattcttctt cccatgtgcc ctatttcaat aaatagaaca actgtttagt cagttgttta ggccagagaa tatcagagtt 003360 003361 gttaggcctg ggaatatcat tcttcagttt ctctcCTTTT TCCTTGTAGT CTAATCAGTC GCCAAGTCTC TCTCtttttt 003440 003441 ttttttttta agatggagtt tcactcttgt tgcccaggct ggagtgcaat ggcgtgatct cggctcaccg caacctgtgc 003520 003521 cccctgggtt caagtgattc tcctgcctca gtctcccaag tagctgcaat tacagtcatg cactaccacg cccggttcat 003600 003601 tttgcatttt tttagtagag acatggggtt tctccatgtc gttcaggcta gtcccgaact cctgacctca ggtgatccgc 003680 003681 ctgcctcagc ctcccaaagt gctgggatta taagcgtgag ccaccgtgcc cagcaataga gttacacctt acaccaaagt 003760 003761 taggttataa gtcagtacat aaggccaaaa ttacatagtt aacataacct ttgaaaatcc ctggccgggc gctgtggctc 003840 003841 acgcctgtaa tccgggcact ttgggaggcc gagttgggcg gatcacctga ggtcaggagt ttgagaccag cctggccaac 003920 003921 atggtgaaac cacgtctcta ccaaaaatac aaaattagct gggtgtggtg gcgtgcctct gtagtcccag ctatttggga 004000 004001 ggctgaggca ggagaatcac ttgaacccag gaggcagagg ttgcagtgag ctgagatcat gccattgcac tccagcctgg 004080 004081 gcgacaagag tgaaactctg tctcaacaaa caaacaaatt aataataaaa GTATGCaaaa cataaatgta ttatagctca 004160 004161 atggatggtt ataaaatgaa cctcctgcaa caaatgccta agtcaagcca aagcatccca gaggccccca cagtgctgct 004240 004241 tcctgatgac gccctcctcc cgtgcccatg aaggaatcct gctcccttga tatttagagt tatcactcaa tcgcttGTTA 004320 004321 AAACTAGTTT ACCCCTAAAA ATGAACCCTA AAAGCAGTCA TTTTGGATtt tgtaaacagc tttattggat ataattcgca 004400 004401 taccattaat tcacccatgt aaaatgtaca attcaatggg ttttggtata ttACATTATT AATTTTTAAA AAGTATGGTA 004480 004481 AAATAAATGT AAGGgcggtg gctcatgcct gtaatcccaa cactttggga gaccgaggtg ggcagatcac ctgaggtggg 004560 004561 gcgtttgaga ccagcctgac caacatggag aaaccccatc tctactaaaa atacaaaatt agggccaggc acggtggctc 004640 004641 acgcctgtaa tcccagcact ttgggaggct gaggtggatg gatcataagg tcaggagttc gagaccagcc tggccaagat 004720 004721 ggtgaaaccc cgtctctact gaaaatacaa aaaaattagc cgggcatggt ggtgggcgcc tgtaatccca gctactcggg 004800 004801 aggctgaggc aggagaatca ggagaatcgc ttgaacctgg gaggcagaag ttggagtgag ccgagattgt gcctgggcaa 004880 004881 caagagcgaa actctgtctc aaaaaataat aataaaaTAG GCTggcgcag tggctcatgc ctgtaatccc agcactttgg 004960 004961 gaggccgagg cagacggatc acctgaggtc gggagttcga gaccagcctg accatggaga aacctcatct ctactaaaaa 005040 005041 tacaaaatta gccgggtgtg gtggtgcatg cctgtattcc cagctattca ggaggctgag gcaggagaat cacttgaatc 005120 005121 cgggaggtgg aggttgtcat gagccaagat cacaccattg cattccagcc tgggcaacaa aaagtgaaac tccgtctcaa 005200 005201 aaataaataa ataaacaaaT GTATGacaaa atttgccatt ttaaccattt ttaagtgtac aactcagtgg cattaattat 005280 005281 attcacaata ttgtacaacc gtcaccacta tctattccaa aacttttcca tcaccccaaa cagaagctct gtaaccatta 005360 005361 agcaataact ggcatccccc ctccctttag cccctgataa ctcctaatat actgtcttta tgaatttgcc tattctgggt 005440 005441 acctcatata atgtgcctat aatatttgtc cttttgcatc tggcttattt cacttagcat aatgttttca aggctcatcc 005520 005521 atgttacagc atgtatcaga acttcattcc cttttatggc tgaatcatat tccattgtat gtgtatacat acaatgtgtg 005600 005601 tatatgccac attttgctta tccattcatc tgttgatgga catttgggtc gttttcatct ttcaactatt gtgaataatg 005680 005681 cacaattatt tcattttgcc aatttttgaa cttcataaga atggaatcag aataattaca acatattttt tgtgcatgtc 005760 005761 tgacttttta aatatgcatt catgttattt tatatacctg tagttcattc attttctttt cttttctttt cttttttttt 005840 005841 tttttttttt ttttttttga gacagggttt tgctcttgtt gcccaggcta gagtgcagtg gtgcaatctt ggctcagcgc 005920 005921 gatctcagct cactgcaacc tccgcctcct gggattctcc tgcttcagcc tcccatgtag ttgggattac aggcgcctgc 006000 006001 caatacgcct ggctaattct gtatttttag cagagacagg gtttctccgt gttggtcaag ctggtctcga actcccgacc 006080 006081 tcaggtgatc tgcctgtctc agcctctcaa agtgctggga ttacaggcgt gagccaccac gcccggcctc attttcatat 006160 006161 ggaattctat ttcagaaata tgccaattta tccattctac tgttgataga tacatgaatt gtttccagtt ttaagctatt 006240 006241 tcaaatatgc tattataaaa atggtagata ttgcatgaat ttctgtcagg tatacagcta ggagttaaat ggctgggtca 006320 006321 gagtttattt ggcttaacta gagaatgcca aagtggttgt actaattttt cttcccacag gcagtgtatg agagttccac 006400 006401 ttgttctaca ccctctccaa ttcttgaggt tgtcaatgtg gttagccatt ctggtgagtt tgtggtgcaa tggtacctca 006480 006481 gtatgggttt aacttgcatt tctgtgttta taaatgaggt taaacacctt gtgatatgtc aattgatcat ttggatatct 006560 006561 tctgtgagat gcctgctcaa gtcccttgcc tatcttctga aagtgttatt gttttatttg ctcatttaag attggtaacc 006640 006641 acctggagtt gattttgaca tttactggga ggtagagggt catgattcat attattccgt ttggagattc agttattcca 006720 006721 gcaccatgtg ttgaaaagac tgttatgacc cctctgcagg ccatgtttgt cataaatcaa gtgtccatat ttgcatgggt 006800 006801 ctatttatgg accttccatt ctactatctg ttcctccttg cacaatactg cacagttggt agctttatat taaagtttga 006880 006881 tatttatagg ccaagcactc cctcccaatt tgttcttcag gaaagtcttg gctattgttT AATGACTGGA CACAAATTGT 006960 006961 AGGAACAGTA TATACAGATT CTTTAAGTAA GTCTTAAAAA TGGAAAAGCC ACccaggtgt ggtggcccac tcccgtaatc 007040 007041 ccagcacttt gggagtccaa ggtgggcaga tcacctgagg gcaggagttc gagatcagcc tggccaacat ggtgaaaccc 007120 007121 cgtctctact aaaaatacaa aaaaattagc tgggtgtggt ggcctgtgcc tgtaatccca gctactctgg aggtggaagc 007200 007201 aggagaatcg cgtgcaccca ggagatggag gttgcagtga gccgagatta cgccactgca ctccagccta ggtgacagag 007280 007281 tgagactgtc tcaaaaaaaa aaaaaaaaga aagaaagaaa aGCCATGTTG TAATCCTTTT CTGAACAGTC ATTCCAGTGA 007360 007361 CTTTCCAGCT TAGAAGTTGG TAGTGGTTgg ccgggagtgg tggctcacgc ctgtaatccc agcactttgg gaggccaagg 007440 007441 caggaggatc gcccaaggtc aggagttcaa gaccagcctg ggcaacgtgg tgaaaccctg tctctactaa aaatacaaaa 007520 007521 agtagctggg catagcggtg catgcctgta gtcccagcta ctcaggaggc tgaggcagga gaatcgcttg aacccaggag 007600 007601 ggggtggttg ccatgagcca agatggcgcc actgcactcc agcctgggca gcaaagtgag actctgtcaa aaaaaaaaaa 007680 007681 aaaacaagaa GTTGGCAgca ctgtccaaca cagtagccac cagccacttg tgactactga gcacttgaaa tgtgattggt 007760 007761 ctgaattgca gtgtactgta agtgtaaaat acacaatgga tttctacaat aaaggatgca agatatcaat atttttcctg 007840 007841 ttgtttacat gaaaacttgg aggtatactg gattaatgaa ctctctctct ctctctctct atatatat |