NONHSAT006355
Revision as of 19:40, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006355 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
837 nt |
Genomic location |
chr1-:151028059..151032249 |
Exon number |
3 |
Exons |
151028059..151028469,151029132..151029262,151031955..151032249 |
Genome context |
|
Sequence |
000001 TTCTCCCCGC AGGGGCGGCG GCCTTGAGGG GCTGCAGAGG CACCCTCCCA CGTCCCGCGC AGTGCAGTGC CTCCGCAGTC 000080
000081 CAGAGGGGAG CAGTGCGCCG GGCTCCGAGC CGGACGGGTT TCGTAATCGC GTCGCCGCCG CTTCCGCCCT CAGCCGGCCC 000160 000161 CACCTCTGCC GGCTCGTACT CGGCTCCCCC ACCTCGCCGC AGAGCTAGCC CGGGAAGCCC ACACTGGCGG CCACGGAGCA 000240 000241 GAGTCCCTCA CCCCCACCAG CTGTAGCTGA ACGTCTGGAT GGTGGAGAAG AGCAGATGAT CTGTACTGGA CACACGTGGA 000320 000321 GATATGGCCA TGCCACGCAT GTGCAAACAG AGGTGTACAC ACAGGAGTGC AGTGATACAG GACACAGATA AACAGAATGT 000400 000401 ACACAGCCTT CAGGAAGGAT CTCAAGGGTT CCGAGTCTGA GGAAGACATA ACCTTGTGCC TGCCTGCCCA CCTCTCTCTC 000480 000481 TGGTCCTGTT CATCTCTCAG GCTCTGAGAC ACTGACCTTC ACTGCTCAGT TAAAGGTTCC AGGGATTCCA CTTTGTCTGG 000560 000561 ACCCATCCAG CTGAGTGAAC CCAGGGTGGT GGTGTATCTG GGGAGAGTGA GGAGTGGGTT GTCCAAACAC CAGGGAAAGA 000640 000641 GCCCTTTGGG GCCTCAGACA GCGGAGTGAA GCTGGAACCA TCAGGGAACA TGAGTGAATT TTGGCACAAA CTGGGCTGCT 000720 000721 GTGTGGTAGA GAAACCCCAG CCGGTGAGTC TCCCCACCCC CCATCCTAAC CCAAAGAGCA GTCAGTTACT GTGTGCTGTG 000800 000801 AGGTAGCCAC ACCATCTAGG ATCTGCCATC TAAAAAA |
Predicted Small Protein
Name | NONHSAT006355_smProtein_689:805 |
Length | 39 |
Molecular weight | 4244.9818 |
Aromaticity | 0.0526315789474 |
Instability index | 61.5236842105 |
Isoelectric point | 8.63409423828 |
Runs | 7 |
Runs residual | 0.0115997229917 |
Runs probability | 0.0337270043154 |
Amino acid sequence | MSEFWHKLGCCVVEKPQPVSLPTPHPNPKSSQLLCAVR |
Secondary structure | LLHHHHHLLLEEELLLLLLLLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |