NONHSAT006355

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT006355

Source

NONCODE4.0

Same with

,

Classification

sense

Length

837 nt

Genomic location

chr1-:151028059..151032249

Exon number

3

Exons

151028059..151028469,151029132..151029262,151031955..151032249

Genome context

Sequence
000001 TTCTCCCCGC AGGGGCGGCG GCCTTGAGGG GCTGCAGAGG CACCCTCCCA CGTCCCGCGC AGTGCAGTGC CTCCGCAGTC 000080
000081 CAGAGGGGAG CAGTGCGCCG GGCTCCGAGC CGGACGGGTT TCGTAATCGC GTCGCCGCCG CTTCCGCCCT CAGCCGGCCC 000160
000161 CACCTCTGCC GGCTCGTACT CGGCTCCCCC ACCTCGCCGC AGAGCTAGCC CGGGAAGCCC ACACTGGCGG CCACGGAGCA 000240
000241 GAGTCCCTCA CCCCCACCAG CTGTAGCTGA ACGTCTGGAT GGTGGAGAAG AGCAGATGAT CTGTACTGGA CACACGTGGA 000320
000321 GATATGGCCA TGCCACGCAT GTGCAAACAG AGGTGTACAC ACAGGAGTGC AGTGATACAG GACACAGATA AACAGAATGT 000400
000401 ACACAGCCTT CAGGAAGGAT CTCAAGGGTT CCGAGTCTGA GGAAGACATA ACCTTGTGCC TGCCTGCCCA CCTCTCTCTC 000480
000481 TGGTCCTGTT CATCTCTCAG GCTCTGAGAC ACTGACCTTC ACTGCTCAGT TAAAGGTTCC AGGGATTCCA CTTTGTCTGG 000560
000561 ACCCATCCAG CTGAGTGAAC CCAGGGTGGT GGTGTATCTG GGGAGAGTGA GGAGTGGGTT GTCCAAACAC CAGGGAAAGA 000640
000641 GCCCTTTGGG GCCTCAGACA GCGGAGTGAA GCTGGAACCA TCAGGGAACA TGAGTGAATT TTGGCACAAA CTGGGCTGCT 000720
000721 GTGTGGTAGA GAAACCCCAG CCGGTGAGTC TCCCCACCCC CCATCCTAAC CCAAAGAGCA GTCAGTTACT GTGTGCTGTG 000800
000801 AGGTAGCCAC ACCATCTAGG ATCTGCCATC TAAAAAA
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Predicted Small Protein

Name NONHSAT006355_smProtein_689:805
Length 39
Molecular weight 4244.9818
Aromaticity 0.0526315789474
Instability index 61.5236842105
Isoelectric point 8.63409423828
Runs 7
Runs residual 0.0115997229917
Runs probability 0.0337270043154
Amino acid sequence MSEFWHKLGCCVVEKPQPVSLPTPHPNPKSSQLLCAVR
Secondary structure LLHHHHHLLLEEELLLLLLLLLLLLLLLLLLLEEEEEL
PRMN -
PiMo -