NONHSAT006489

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT006489

Source

NONCODE4.0

Same with

,

Classification

sense

Length

617 nt

Genomic location

chr1-:152551505..152552980

Exon number

3

Exons

152551505..152551511,152551860..152552433,152552945..152552980

Genome context

Sequence
000001 CTCAGGAACA GCCTTCTCCT GCCTCCTCTG CACCTGGACA ACTCAACTCC TGCCAAGATG TCCTGCCAGC AGAACCAGCA 000080
000081 GCAGTGCCAA CCCCCACCCA AGTGTCCCTC ACCCAAGTGT CCCCCAAAGA GCCCAGTACA GTGTCTGCCT CCAGCTTCCT 000160
000161 CTGGCTGTGC CCCAAGCTCT GGGGGCTGTG GCCCTAGCTC CGAGGGCGGC TGCTTCCTGA ACCACCACAG GCGCCACCAC 000240
000241 CGATGCCGGC GCCAGAGGCC CAACTCCTGT GACAGGGGCA GTGGTCAGCA AGGCGGGGGC TCTGGCTGCG GCCATGGCTC 000320
000321 TGGAGGCTGC TGCTGACCTG GATCCTGATG CTGAGACAAG CGATTTTGGA GGAAACAAGA ATCCCAAGGG CCCAGGAAAA 000400
000401 CCCCATCTTG ATGCATGAGT TCCCAGATAC CCTCTTCTGG CTTTCACAGG CTGAGCTAGG GGTTTTCCTG TGGAAGGTCT 000480
000481 GAGCTCTCCC CAGAAGGCAC TTCCTGTCTG ATGTCCAGGA TGTCACATGT TCCCTTACCC CTGTACCTGT GAAGGATTGG 000560
000561 CAGTGCTTGT GCCTGACCTC ATCAAAAAAT AAAGCTCCTT GTCCTCATTA AAAAAAA
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Predicted Small Protein

Name NONHSAT006489_smProtein_347:481
Length 45
Molecular weight 5268.1185
Aromaticity 0.113636363636
Instability index 58.9454545455
Isoelectric point 5.05389404297
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0368435662553
Amino acid sequence MLRQAILEETRIPRAQENPILMHEFPDTLFWLSQAELGVFLWKV
Secondary structure LHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLEEL
PRMN -
PiMo -