NONHSAT006567
Revision as of 19:41, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006567 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
542 nt |
Genomic location |
chr1-:153948293..153950131 |
Exon number |
5 |
Exons |
153948293..153948381,153949169..153949251,153949452..153949489,153949646..153949865,153950020..153950131 |
Genome context |
|
Sequence |
000001 AGCCCCAGCG GGCGACGACC GAACGCCCCC GGGAACACCG GGCCCCGAGC TCGGTCCCGC GCCCGAGGAT CCTCCACGGG 000080
000081 GCTAGATGGC TGCGTCGGGG GCGGGAGCGG AGGCAACTCC GGCCTTCCCT GCCCTGACCT GGAACCTCTG GGAGGGCTGC 000160 000161 AGAGTAAGTG CCGCCTCTGC GCTCCGACGG AGGCACGAGG CCTGTGGAGT AGGTCCCTCT GTTCCGACAG GTGCGACACT 000240 000241 TGGCGCTCCA TGCTTGCGGG TGCCGGGAGG CCTGGCCTCC CCCAGGGCCG CCACCTCTGC TGGTTGCTCT GTGCTTTCAC 000320 000321 CTTAAAGCTC TGCCAAGCAG AGGCTCCCGT GCAGGAAGAG AAGCTGTCAG CAAGCACCTC AAATTTGCCA TGCTGGCTGG 000400 000401 TGGAAGAGTT TGTGGTAGCA GAAGAGTGCT CTCCATGCTC TAATTTCCGG GCTAAAACTA CCCCTGAGTG TGGTCCCACA 000480 000481 GGATATGTAG AGAAAATCAC ATGCAGCTCA TCTAAGAGAA ATGAGTTCAA AAGGTGAGTG CT |
Predicted Small Protein
Name | NONHSAT006567_smProtein_389:442 |
Length | 18 |
Molecular weight | 1806.2285 |
Aromaticity | 0.0 |
Instability index | 61.6941176471 |
Isoelectric point | 11.7002563477 |
Runs | 5 |
Runs residual | 0.00735294117647 |
Runs probability | 0.0463875640348 |
Amino acid sequence | MLAGGRVCGSRRVLSML |
Secondary structure | LLLLLEELLLHHHHHLL |
PRMN | - |
PiMo | - |