NONHSAT006824

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT006824

Source

NONCODE4.0

Same with

,

Classification

sense

Length

931 nt

Genomic location

chr1+:156211980..156213080

Exon number

2

Exons

156211980..156212382,156212553..156213080

Genome context

Sequence
000001 AGCTGAGTCC TGAGCAGCAG CCCAGCGCAG CCACCGAGAC ACCATGAGAG CCCTCACACT CCTCGCCCTA TTGGCCCTGG 000080
000081 CCGCACTTTG CATCGCTGGC CAGGCAGGTG AGTGCCCCCA CCTCCCCTCA GGCCGCATTG CAGTGGGGGC TGAGAGGAGG 000160
000161 AAGCACCATG GCCCACCTCT TCTCACCCCT TTGGCTGGCA GTCCCTTTGC AGTCTAACCA CCTTGTTGCA GGCTCAATCC 000240
000241 ATTTGCCCCA GCTCTGCCCT TGCAGAGGGA GAGGAGGGAA GAGCAAGCTG CCCGAGACGC AGGGGAAGGA GGATGAGGGC 000320
000321 CCTGGGGATG AGCTGGGGTG AACCAGGCTC CCTTTCCTTT GCAGGTGCGA AGCCCAGCGG TGCAGAGTCC AGCAAAGGTG 000400
000401 CAGCCTTTGT GTCCAAGCAG GAGGGCAGCG AGGTAGTGAA GAGACCCAGG CGCTACCTGT ATCAATGGCT GGGGTGAGAG 000480
000481 AAAAGGCAGA GCTGGGCCAA GGCCCTGCCT CTCCGGGATG GTCTGTGGGG GAGCTGCAGC AGGGAGTGGC CTCTCTGGGT 000560
000561 TGTGGTGGGG GTACAGGCAG CCTGCCCTGG TGGGCACCCT GGAGCCCCAT GTGTAGGGAG AGGAGGGATG GGCATTTTGC 000640
000641 ACGGGGGCTG ATGCCACCAC GTCGGGTGTC TCAGAGCCCC AGTCCCCTAC CCGGATCCCC TGGAGCCCAG GAGGGAGGTG 000720
000721 TGTGAGCTCA ATCCGGACTG TGACGAGTTG GCTGACCACA TCGGCTTTCA GGAGGCCTAT CGGCGCTTCT ACGGCCCGGT 000800
000801 CTAGGGTGTC GCTCTGCTGG CCTGGCCGGC AACCCCAGTT CTGCTCCTCT CCAGGCACCC TTCTTTCCTC TTCCCCTTGC 000880
000881 CCTTGCCCTG ACCTCCCAGC CCTATGGATG TGGGGTCCCC ATCATCCCAG C
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Predicted Small Protein

Name NONHSAT006824_smProtein_464:724
Length 87
Molecular weight 8864.9022
Aromaticity 0.0581395348837
Instability index 78.9011627907
Isoelectric point 8.93658447266
Runs 11
Runs residual 0.0117146824019
Runs probability 0.0460968990381
Amino acid sequence MAGVREKAELGQGPASPGWSVGELQQGVASLGCGGGTGSLPWWAPWSPMCRERRDGHFAR
GLMPPRRVSQSPSPLPGSPGAQEGGV
Secondary structure LLLLHHHHHLLLLLLLLLLLHHHHHHLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLEEL
LLLLLLEELLLLLLLLLLLLLLLLLL
PRMN -
PiMo -