NONHSAT006998

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT006998

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1031 nt

Genomic location

chr1-:159165775..159166793

Exon number

1

Exons

159165775..159166793

Genome context

Sequence
000001 AGCCGTAGGT GCCACTGTCA CTCTTGTTGA GGAAAGGGAA GATCAGGGCA CTCTCCTGGG TCATCTTCAG GGGTGGCACA 000080
000081 CTGCCCTCCT TCTCCCATAG GTACTGCTGG GGGCTGTCGA GGCAGACAAA TCAGAAGAGC TCAGGAGAGC ATAGGCCAGG 000160
000161 GAGCTAAAAG AAAAAAAAAA ATAACTGGGA GCAGGGATGT CAAGGACTGT TTGATGAGGC TGGAGAAATT ATCGGGGCCA 000240
000241 GAGACACTGG AGCTGCTATA CGCCAGGTGG CCTCTTGGGG TTCGTTCTGG GGAAGCTGTA GATCTCCAGA CTTGTATCTT 000320
000321 ACTTTAACTT GGCCTTTGTG GGAAACTCAG GGACTGAGTT AGGGAGTGGC CCCTTCCCAT TTGTGCTGCT TTGCAGAAGA 000400
000401 ACTAATTGCA GGCGGACATT ATTGGACAGT CAGGGAAATG AGAGGCTCAG GTCAGACAAT ACAGAGGAGA TAGGAAGGAG 000480
000481 CTGTTATGTG AAGAAGGCAA TCTGAGAATG TGGAGAGTAA GGAGGAGACC AGGAAATGGA TCTTCTTACA CTGGATTGCC 000560
000561 GCGACCCTCA CAGTGTAGCA ACAGCTTCTG GCCCTCACGA GGATGGGGAG GGTCTGGCCT AATCATCGCA GTTGGTGTGT 000640
000641 CTGTGGAGAA GGAAATGGTA TCAATGAATA CCTCCCCACA CGGCTTAGGA GATTCCCTCA CTTAGTTGCA CACTACAGCT 000720
000721 TCTACCTCTA AATGTTTCCG CAGCTCAAGA AGTGCAACAA AGACCTTCCT TCTCCTACTT CTCATGAACA AGGACCATTA 000800
000801 TTGCTATTGA ATATGTGAGC AACTTCTCTT GCAACCTTGT GTGATAGGAT TCTGGAAGGT CTGTCCTTGG TGGGCCCTAA 000880
000881 GAGATGTCTT AACAGAAAGC TGAGAAGGGA AATGAGTGGT TTACCTGTGC CTAGCAAACC TCCTAGCACA TAGGAAAGAC 000960
000961 CTAATACATA TTTTTTACAG AACAAATAAA GTTGAACTTG TCACATATTG AGCTCACAAA AAAAAAAAAA A
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Predicted Small Protein

Name NONHSAT006998_smProtein_602:730
Length 43
Molecular weight 5033.7345
Aromaticity 0.166666666667
Instability index 52.6097619048
Isoelectric point 9.38067626953
Runs 9
Runs residual 0.038125376733
Runs probability 0.0227482384345
Amino acid sequence MGRVWPNHRSWCVCGEGNGINEYLPTRLRRFPHLVAHYSFYL
Secondary structure LLLELLLLLLEEEELLLLLLLLLLLLHHHLLLLEEEEEEEEL
PRMN -
PiMo -