NONHSAT007242
Revision as of 19:44, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007242 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
586 nt |
Genomic location |
chr1-:162824879..162825736 |
Exon number |
2 |
Exons |
162824879..162825149,162825422..162825736 |
Genome context |
|
Sequence |
000001 ctttccttat aaggacaccg gtaatatagg attagtaccc accctaatga cctcatttta atttgatttt ctctgtaaag 000080
000081 accttatctc caaataaggt cccaccctaa ggtactgggg gttaggactt gagcataaaa aatttaagga cacaatccaa 000160 000161 ctcataacaC TTCTTAATTA ACTCAAAGCA GAAACCATGA AGAAAAAGTT CTCCTCTTAT TTGGGGAATG GATTTCAGAA 000240 000241 GAGACCAGAA GATGTTCTCG TGTTCTCACC ACAGGGAAGG CAGAAGCACA GAGCCCCACA GGCTAAGAAA ATGAGAGCAT 000320 000321 TGGCAACCCG TATGGCCCAA GACACATGCA AAAGCAAGTC CCAGGTGCCT CCTTCACATG ATGCTGGCCT CAAAGACCCC 000400 000401 ATGAAGAGCA AAAAGCAGCC ACTCTCTCAA AATAACAGAA CTGCCTGCTT CATAAAAGAG CAACCACAAG CCCAAGAGAA 000480 000481 AGATTCTGTG AATCCATCTA AGGACGTAGA CCCCAGCAAG GGCATCTCTG TTCCATGCCA AAATCAAGAG GTTTCCACCA 000560 000561 ACACCATAGA ACAAGGTCCT AGTTCC |
Predicted Small Protein
Name | NONHSAT007242_smProtein_227:313 |
Length | 29 |
Molecular weight | 3528.9664 |
Aromaticity | 0.0714285714286 |
Instability index | 87.0214285714 |
Isoelectric point | 10.7501831055 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0023670729553 |
Amino acid sequence | MDFRRDQKMFSCSHHREGRSTEPHRLRK |
Secondary structure | LLLHHHLLLEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |