NONHSAT007512
Revision as of 19:46, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007512 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
713 nt |
Genomic location |
chr1+:171069903..171076894 |
Exon number |
3 |
Exons |
171069903..171070347,171072926..171073114,171076816..171076894 |
Genome context |
|
Sequence |
000001 agaggatggC Ctgtaatagg ctgaacaatt taacaatgcc cctcctcaaa gatatcacat ccaaattcct ggaacctgta 000080
000081 aatgttatct tacttacaag agaaaagggt atttgcaaat ataattaagt taaaaatctt aagatggaga gatttttctg 000160 000161 cattatgtgg gtgagcccca aacgctataa tgaatgcatc gttaaaagag agaggcagag ggagatttaa cacaaagaga 000240 000241 agagagaagg tgatgtgatg acctcaacag aaagagagaa atttgaagat gctatgctct atctttgatg atggccagag 000320 000321 gagccatgag tgaaggcgta caagaggggt cttgccactg aaaaaaataa gaaatgccag catccaccag aagccagaag 000400 000401 cggcaaggaa tggattctct cctggagcct ctgaaaatga acatgGACCA TGCAGAGGAG GGCAGGGCTA GCATTTACAA 000480 000481 ATCAGTCTTT TCCAACTCTT CCAAAGAGAT GATGTGTTTC CCAGACTTCC CATTTCCCGA TGACTTCCCC AACTTTATGC 000560 000561 ACAACAGCAA GATCCAGGAA TATATCATTG CATTTGCCAA AGAAAAGAAC CTCCTGAAGT ACATACAATT TAAGACATTT 000640 000641 GTATCCAGTG TAAATAAACA TCCTGATTTT GCAACTACTG GCCAGTGGGA TGTTACCACT GAAAGGGATG GTA |
Predicted Small Protein
Name | NONHSAT007512_smProtein_5:127 |
Length | 41 |
Molecular weight | 4608.5157 |
Aromaticity | 0.05 |
Instability index | 42.8825 |
Isoelectric point | 9.23712158203 |
Runs | 9 |
Runs residual | 0.0469758064516 |
Runs probability | 0.0382441264795 |
Amino acid sequence | MACNRLNNLTMPLLKDITSKFLEPVNVILLTREKGICKYN |
Secondary structure | LLLLHHHLLLLHHHHHHHHHHLLLLLEEEEELLLLEEELL |
PRMN | - |
PiMo | - |