NONHSAT007735
Revision as of 19:47, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007735 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
520 nt |
Genomic location |
chr1+:174669551..174721492 |
Exon number |
3 |
Exons |
174669551..174669884,174671251..174671394,174721451..174721492 |
Genome context |
|
Sequence |
000001 TATTGGGGAA GGGTAAAATG GTTGAGGAAG GAGGTTCGTG GAATGTGAGA GCAGAAGATG CTAGTAGGAG CTCATTGATA 000080
000081 TGAACTGCCA GGGGATCCGT AGGTGTCTAA AGAGGGAAGT GAAGCCAGTA GGAGACTGAG AGATTAGAAG AACAGGGCAG 000160 000161 TAGAGGATGA ATTTGCAGTG AGGTTAAAGG AACAATTTAT TGGGAGAAGG GAATGTAGGA GGGTAGAAGA CTTTAAAATT 000240 000241 GAAAAGAAAT AAAAGGAGGC AGGGATGTAA AACGAGCCAT AAGTACAATG ACAAATGGGC ATTAAGGAGG AAAAAGACTA 000320 000321 TGTAGAAGAA TCTGGAACAG CTACCGGACC TGCATAGCCA TTTTTCTGAT CTGAACCTGG AAGCTCATAT GTATGCATCC 000400 000401 CAGTGGTTTC TCACTCTTTT TACTGCCAAG TTCCCACTCT GCATGGTGTT CCACATCATT GACTTACTGC TTTGTGAGGG 000480 000481 TTTGAACATA ATCTTTCATG TAGCTTTGGC TCTCCTAAAG |
Predicted Small Protein
Name | NONHSAT007735_smProtein_392:484 |
Length | 31 |
Molecular weight | 3361.8668 |
Aromaticity | 0.166666666667 |
Instability index | 53.48 |
Isoelectric point | 7.86822509766 |
Runs | 7 |
Runs residual | 0.0310810810811 |
Runs probability | 0.0284906755495 |
Amino acid sequence | MHPSGFSLFLLPSSHSAWCSTSLTYCFVRV |
Secondary structure | LLLLLLEEEELLLLLLHHHLLLLEEEEEEL |
PRMN | - |
PiMo | - |