NONHSAT007806

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT007806

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

607 nt

Genomic location

chr1-:177994765..178001627

Exon number

4

Exons

177994765..177995097,177995290..177995390,178000686..178000795,178001565..178001627

Genome context

Sequence
000001 GATAGAGTTA TTGGCACAAG AAACTTTAAT TGTATGGCTG AAGAATGCGT CACTGACCAG AAGGACCTGT GGCAGATTCC 000080
000081 AGAAAAGGTC TCCCTATAAG AAGCTGCTGT CCTCCCTATA ACTTATGGCA CTGCGATTTT TGCTCTTGAG CATTGGGCCC 000160
000161 GTACCCAGCC TGGGTAATAT AGCTGCTGCT GGAAGTGACG AGAAGTGCAA GCTGGCGATG CAGAGGGGTG CGCAGTCCAG 000240
000241 CGTGAACTAC AGTCAGGGCA GCCTGAAGGA TGCAGCATCA GCATCAACGA GAACAGCAAG TGGGTGGGTG AAAAGGAATA 000320
000321 GAAGCAGAGA AAATCAGGAA ATGCTTATAT ATAGCAAAAA CAAAATACCC ATCTGGAAAA TATCCAAAAA ATGACTGCAG 000400
000401 ACTCTCTTAG TTGGCAATGC CAAATGCTTT AGAAATTATT CATGTGTTAA ATTCAGTTAT GCCAGTTCTC ACTAACTACT 000480
000481 TTATATCCAT GTCTGTGGGG AATTCTTGCA GAGGGCATTG TTCAGCTATT AGAATTACTG GGGTGGCAGT TCCCCTTTTC 000560
000561 CCAGTTCATT GTGGACCAAA CTACAGGCTC TTCTGATCTT ACTGCTT
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Predicted Small Protein

Name NONHSAT007806_smProtein_416:595
Length 60
Molecular weight 6458.604
Aromaticity 0.0847457627119
Instability index 44.9423728814
Isoelectric point 8.65875244141
Runs 10
Runs residual 0.0250349867828
Runs probability 0.0455838191133
Amino acid sequence MPNALEIIHVLNSVMPVLTNYFISMSVGNSCRGHCSAIRITGVAVPLFPVHCGPNYRLF
Secondary structure LLLHHHHHHHHLLLLHHHHHEEEEEELLLLLLLLLLEEEEELLEELLLLLLLLLLLLLL
PRMN -
PiMo -