NONHSAT007806
Revision as of 19:47, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007806 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
607 nt |
Genomic location |
chr1-:177994765..178001627 |
Exon number |
4 |
Exons |
177994765..177995097,177995290..177995390,178000686..178000795,178001565..178001627 |
Genome context |
|
Sequence |
000001 GATAGAGTTA TTGGCACAAG AAACTTTAAT TGTATGGCTG AAGAATGCGT CACTGACCAG AAGGACCTGT GGCAGATTCC 000080
000081 AGAAAAGGTC TCCCTATAAG AAGCTGCTGT CCTCCCTATA ACTTATGGCA CTGCGATTTT TGCTCTTGAG CATTGGGCCC 000160 000161 GTACCCAGCC TGGGTAATAT AGCTGCTGCT GGAAGTGACG AGAAGTGCAA GCTGGCGATG CAGAGGGGTG CGCAGTCCAG 000240 000241 CGTGAACTAC AGTCAGGGCA GCCTGAAGGA TGCAGCATCA GCATCAACGA GAACAGCAAG TGGGTGGGTG AAAAGGAATA 000320 000321 GAAGCAGAGA AAATCAGGAA ATGCTTATAT ATAGCAAAAA CAAAATACCC ATCTGGAAAA TATCCAAAAA ATGACTGCAG 000400 000401 ACTCTCTTAG TTGGCAATGC CAAATGCTTT AGAAATTATT CATGTGTTAA ATTCAGTTAT GCCAGTTCTC ACTAACTACT 000480 000481 TTATATCCAT GTCTGTGGGG AATTCTTGCA GAGGGCATTG TTCAGCTATT AGAATTACTG GGGTGGCAGT TCCCCTTTTC 000560 000561 CCAGTTCATT GTGGACCAAA CTACAGGCTC TTCTGATCTT ACTGCTT |
Predicted Small Protein
Name | NONHSAT007806_smProtein_416:595 |
Length | 60 |
Molecular weight | 6458.604 |
Aromaticity | 0.0847457627119 |
Instability index | 44.9423728814 |
Isoelectric point | 8.65875244141 |
Runs | 10 |
Runs residual | 0.0250349867828 |
Runs probability | 0.0455838191133 |
Amino acid sequence | MPNALEIIHVLNSVMPVLTNYFISMSVGNSCRGHCSAIRITGVAVPLFPVHCGPNYRLF |
Secondary structure | LLLHHHHHHHHLLLLHHHHHEEEEEELLLLLLLLLLEEEEELLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |