NONHSAT007824
Revision as of 19:47, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007824 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
939 nt |
Genomic location |
chr1+:178538612..178539550 |
Exon number |
1 |
Exons |
178538612..178539550 |
Genome context |
|
Sequence |
000001 ataatatagt ataatttatt tgtatttttt ctcagatatt agtatttcta ttccagttct cttttggtta ttgtttatat 000080
000081 ggtgtatctt tttcccttct tttgctttca gactgtttct gtctttgaat ctacattttg tcccttacaa agaacatata 000160 000161 gttctatgat ttttaaaatc cattctgcca atatctgtct tttaattgga gtgtttcagt gttaatcttg aggatcctat 000240 000241 gtatatgatg agttactttt ttttgctgtt tttaagattc tttgtctatg gcttttgaca gtttgatttt gaagtgtcta 000320 000321 ggtgtggata ttttgaattt attccacttg gagtttgttg agcttcgtgg atgtgtaaat tcatgttttt aatcaaatct 000400 000401 gttaagtatt gagcccttat gtcttcaagt actttttttc cccctttctt tttcttgctt ctttctggta cttcagttat 000480 000481 gcctattaac acttgatggt gtcccacaca agtctttgag gctctgttca ttttccttca ttctttttct ttctgagatt 000560 000561 ggataaccac aattggccta tcttcaagtt tcccaattct ctcttcttcc tgctcacacc tttcctggtg ttcctcttgt 000640 000641 gaatttttca tgttaatgcc agaatttcta tttgattttt aaaaataaat tatatctctc tccttttttt tttttttttg 000720 000721 agatggagtc tcgctctgtc acccaggctg gagtgcagtg gtgtgatctt ggctcactgc aacctccaac tcccgggttc 000800 000801 aagcattctc ctgcctcaat ctcccgagta gctgggatta caggtgcgtg ctaccatacc tggaaatttt tgtatttttt 000880 000881 tagtagagac ggggtctcac catgttggta aggctggtct cgaactcttg accttgtga |
Predicted Small Protein
Name | NONHSAT007824_smProtein_722:910 |
Length | 63 |
Molecular weight | 6850.7094 |
Aromaticity | 0.145161290323 |
Instability index | 60.1322580645 |
Isoelectric point | 8.61138916016 |
Runs | 7 |
Runs residual | 0.0407373271889 |
Runs probability | 0.0414111590582 |
Amino acid sequence | MESRSVTQAGVQWCDLGSLQPPTPGFKHSPASISRVAGITGACYHTWKFLYFFSRDGVSP CW |
Secondary structure | LLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLEEEEEEEELLLLLL LL |
PRMN | - |
PiMo | - |