NONHSAT008941
Revision as of 19:51, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008941 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
699 nt |
Genomic location |
chr1-:204338238..204338936 |
Exon number |
1 |
Exons |
204338238..204338936 |
Genome context |
|
Sequence |
000001 CAGGTTGAGT CCTTCCACCT CATTATCATC CTAGGTAGGA GTGGAAGATG AATACCAGCC TGTGAGCCAA TGCTTTCATT 000080
000081 TTTGGCTGCA GCCAACTGGT TGTCTAAGGC TGGGAAGGGG TTAAGATGCC CCCGGAGCTT GCCGCGAGGG CAGCTGCCTC 000160 000161 AGCGGGCACT CCGCCTGGAT GGGAATATAA GCACTCTTGG TGTTGCCCAG GCAGAGAGGG CAGTGTGGAG GGAAGTTGCT 000240 000241 AGAAAAAGGC AGGGGACATA ATCCATACTG GCCTCTTTCC CAGGCACATC ACAGTGGCAG AATTATTTAT GATTCTGACC 000320 000321 CAATGGGGAT CCCTCTACTT GGGGAGACTG CCAACCCACG CCCTCCTGAA TGGCAACGTC CTCCCACAGA GACAGAGGGG 000400 000401 AACAAGTAGC ATTTATGGAG CGGCACAGAG GAAAGAGTGT GGGCTTTGGA GACAGCACAG CAGCACTCAC ATCCCGGCCC 000480 000481 AGACACTTCC TGTGTGACCT TGAGCCAGTT GATGAACCTG TCTGGGCCTC TGTTTCCTCA TCTGTTATCG GCGAAAATGT 000560 000561 TTCGGAGGAC ACCTATTGTA TAATGTTGCT ATGCAGATTA AATGCACTAG CAGAGGCAAA GTGCATAGCT TAGAGGAAGG 000640 000641 AAGTACTCGC TAAGTGGTAG CTGGTGTGAT AGGTGGGCCA AGTCCTGGCA GGAGCTGGG |
Predicted Small Protein
Name | NONHSAT008941_smProtein_308:496 |
Length | 63 |
Molecular weight | 6909.8729 |
Aromaticity | 0.0645161290323 |
Instability index | 49.3790322581 |
Isoelectric point | 10.8866577148 |
Runs | 10 |
Runs residual | 0.00764976958525 |
Runs probability | 0.036663133722 |
Amino acid sequence | MILTQWGSLYLGRLPTHALLNGNVLPQRQRGTSSIYGAAQRKECGLWRQHSSTHIPAQTL PV |
Secondary structure | LEEEEELLLLLLLLLLHHHHLLLLLLLLLLLLLLEEHHHHHHLLLLEEELLLLLLLLLLL LL |
PRMN | - |
PiMo | - |