NONHSAT009112

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT009112

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

478 nt

Genomic location

chr1+:207399143..207402547

Exon number

3

Exons

207399143..207399302,207401646..207401847,207402432..207402547

Genome context

Sequence
000001 TTCCTCCCAT TGGCCATGGG TCCTATGAAG ATGTGAGATC ATTTTTTATT CTCTACTACT CTGGTGCACT GTCACTGTGA 000080
000081 TGATGGATAT GTTCTAATTG GAGAGGCTGA AGTCACCTGC AGAAATTCAC ATTGGTCAGC TCCAGCCCCT CAATGTAAAG 000160
000161 CTCTGTGTCT GAAACCAGAG ACAGAAAATG GAAAGCTGTC TGGGTAAGGA TCTGTATGTT GAACTTGAAA ATGTCACCAT 000240
000241 CCAGTGTGAC TCTGGCTATA AAGTGGTTGG TCCTCAAAAT ATCACTTTGG TTGGTCCTCA AAATATCACT TGATCAGAGC 000320
000321 ACAGAACATG GCAGGCACCC AGAGGTGCCC AGTTGTGAGT GGGTTGTGAG CAAGTGCTCA CGGGTAGAAA GCTCATGCAG 000400
000401 TGTCTCCCAC ACCCAGAGGA TTCGAAAATG ACCCTGGAGG TGTAAAAGCT GTCTCTGGAG ATTAAACGAC TGGAACAC
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Predicted Small Protein

Name NONHSAT009112_smProtein_215:430
Length 72
Molecular weight 8074.4528
Aromaticity 0.0422535211268
Instability index 59.138028169
Isoelectric point 9.56988525391
Runs 8
Runs residual 0.0358784284655
Runs probability 0.0292461579226
Amino acid sequence MLNLKMSPSSVTLAIKWLVLKISLWLVLKISLDQSTEHGRHPEVPSCEWVVSKCSRVESS
CSVSHTQRIRK
Secondary structure LLLLLLLLLHHHHHHHHHHHHHHHHHHHHEEELLLLLLLLLLLLLLLEEEEEEEEEEEEE
EEELLLEEEEL
PRMN -
PiMo -