NONHSAT009112
Revision as of 19:52, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009112 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
478 nt |
Genomic location |
chr1+:207399143..207402547 |
Exon number |
3 |
Exons |
207399143..207399302,207401646..207401847,207402432..207402547 |
Genome context |
|
Sequence |
000001 TTCCTCCCAT TGGCCATGGG TCCTATGAAG ATGTGAGATC ATTTTTTATT CTCTACTACT CTGGTGCACT GTCACTGTGA 000080
000081 TGATGGATAT GTTCTAATTG GAGAGGCTGA AGTCACCTGC AGAAATTCAC ATTGGTCAGC TCCAGCCCCT CAATGTAAAG 000160 000161 CTCTGTGTCT GAAACCAGAG ACAGAAAATG GAAAGCTGTC TGGGTAAGGA TCTGTATGTT GAACTTGAAA ATGTCACCAT 000240 000241 CCAGTGTGAC TCTGGCTATA AAGTGGTTGG TCCTCAAAAT ATCACTTTGG TTGGTCCTCA AAATATCACT TGATCAGAGC 000320 000321 ACAGAACATG GCAGGCACCC AGAGGTGCCC AGTTGTGAGT GGGTTGTGAG CAAGTGCTCA CGGGTAGAAA GCTCATGCAG 000400 000401 TGTCTCCCAC ACCCAGAGGA TTCGAAAATG ACCCTGGAGG TGTAAAAGCT GTCTCTGGAG ATTAAACGAC TGGAACAC |
Predicted Small Protein
Name | NONHSAT009112_smProtein_215:430 |
Length | 72 |
Molecular weight | 8074.4528 |
Aromaticity | 0.0422535211268 |
Instability index | 59.138028169 |
Isoelectric point | 9.56988525391 |
Runs | 8 |
Runs residual | 0.0358784284655 |
Runs probability | 0.0292461579226 |
Amino acid sequence | MLNLKMSPSSVTLAIKWLVLKISLWLVLKISLDQSTEHGRHPEVPSCEWVVSKCSRVESS CSVSHTQRIRK |
Secondary structure | LLLLLLLLLHHHHHHHHHHHHHHHHHHHHEEELLLLLLLLLLLLLLLEEEEEEEEEEEEE EEELLLEEEEL |
PRMN | - |
PiMo | - |