NONHSAT009527
Revision as of 19:54, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT009527 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1170 nt |
Genomic location |
chr1+:219092181..219098202 |
Exon number |
2 |
Exons |
219092181..219092949,219097802..219098202 |
Genome context |
|
Sequence |
000001 AAACAGCATC ATCAGTGTCT CAAATTGTCA AATGACTGGG AGGAAAACCC TTGGCCCAGG AGAGATCACG GAAGGCTGGT 000080
000081 CACAAACCAA GCCAGATGTT GACTTTCTTA AGACCAGCGA ATAGAGACAG GAGTTTCTTT TATACTTAGA GAAACCAGAG 000160 000161 AGTTTCACGG TAGCGTAACA ACACGAGTGG TAAGAGTTGT CTATCAGAAA TACAAAGCCA GACCCATTGC TCTCTGAAGA 000240 000241 AGCCACACAT TTCCTAGAAG ATCCAGCCTT GGCTACTCTT CCACTTAGTA TCCACAGCTA CTAGATACGC TACCTCACAC 000320 000321 CTGTAACCCA GATGTCATAG GTCTCAGGCT GGGTACTCAG TCTTTGCCTT GCACCTTAAG ACTGAACTTT GATGCATTGC 000400 000401 TGAAATAAAT TTAACTCCAC AATGAGAAAT AAAATGTTTA ATCAAATTTA ATGGGGAATT ATTGAAGAGA GGTGCATGTA 000480 000481 CATCACAGAG GAGAAGCCTA TCTGGCCACC TCCGTGATCC CCCCATTATC CATTAATGTT CTTCTCCTAG TCTCAGCTCC 000560 000561 CCACTTCTCT CCTTTCTCCT GGAAATTCCC ATCTATGCAG CCTCTGGCCA CTCTGGATCC ACTCTGCCTC CTGCCTCTCA 000640 000641 GCCACACAGT ATGCCCATTC TTCTGTGGCA TCATTTATCT CCCTCTGGTT TTCTCCACTG TGAATCCTCA CACATATCAC 000720 000721 TTAACTTAGT AAGCAAGTCT CCATCTGTCT TGAAAAAAAG AAGAAAATGG ATGATGGAAT GGAAGAAAGA GAACTAAAGG 000800 000801 AGAGCCATCA AATCAGACAA AAGCTATCTG TCTCTTTGGA GAGACAACCT CTGGGCTCAT CCACTGCATT ACATTCTTAG 000880 000881 AGCTTGTAGA AGagcggtca ttaaatattt tcaaggctac agactccttc aagaattgat aaaagctata gaacttcttt 000960 000961 ccacaaaaat gcatgtattg cacactgaat gtctgcatgc agtccttgag gggaggacct ctgaggccta tcTCTGAGTC 001040 001041 TGCAGTGTCC ATGAGCCCAT GTCAGGAATT CCTGCAACAC ACATTATGTG ATTTTAAAAT ACTTAAATGA AAGTTTTTTC 001120 001121 CAGTGTCCTC CAGAAGCAAA TTCCATTAAA CAAGCCAATG TGTATAATAT |
Predicted Small Protein
Name | NONHSAT009527_smProtein_650:796 |
Length | 49 |
Molecular weight | 5727.755 |
Aromaticity | 0.0833333333333 |
Instability index | 94.4958333333 |
Isoelectric point | 10.0195922852 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0304323931775 |
Amino acid sequence | MPILLWHHLSPSGFLHCESSHISLNLVSKSPSVLKKRRKWMMEWKKEN |
Secondary structure | LLEEEEELLLLLLEEEELLLLEEELLLLLLHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |