NONHSAT009596
Revision as of 19:54, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009596 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
656 nt |
Genomic location |
chr1+:220462045..220465239 |
Exon number |
2 |
Exons |
220462045..220462668,220465208..220465239 |
Genome context |
|
Sequence |
000001 cccaggctgg agtggagcag tgccatctcg gcttacggca acctctcagg ttcgagcaat tcacctgcct cagcctcccg 000080
000081 agtatctgag gctataggca tgtgccacca cacctagcta attttttgta tttttagtag agacagggtt tcaccaagtt 000160 000161 ggctggtctc gaactcctga cctcaatgat ctgcctgcct cagcctccca aagtactggt attacaggca tgtgccacca 000240 000241 tgcccggccA ATTTTCTGtt tttcttcttt tcttttcttt tttttgaatc agagtctccc tctgtcaccc aggctggagt 000320 000321 gcagtgtcac gatctcggct cagtgcaacc tccgccctcc ggattcaagc gattatcctc tctcagcctc ccaagtagct 000400 000401 gggagtacag gtgcacgcca ctgcatccgg ctaatttttg tatttttagt agagatgggg tttcgccatg ttggccaggc 000480 000481 tagtctcaaa ctcctgacct caggtgatcc gcctgcctcg acttcccaaa gtgctcagat tacaggtgtg aaaagtgcat 000560 000561 tcctagatag tatttttcct tggggattca tgaatgtagg tcgttcagtg ttttctgaca atgtcctctg gcagccaacc 000640 000641 accattctac tttgtg |
Predicted Small Protein
Name | NONHSAT009596_smProtein_185:286 |
Length | 34 |
Molecular weight | 3721.5608 |
Aromaticity | 0.181818181818 |
Instability index | 70.5303030303 |
Isoelectric point | 7.82183837891 |
Runs | 10 |
Runs residual | 0.118906455863 |
Runs probability | 0.0304186539482 |
Amino acid sequence | MICLPQPPKVLVLQACATMPGQFSVFLLFFSFF |
Secondary structure | LEELLLLLLEEEHHHHHLLLLLEEEHHHEEEEL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i???????????????????????????????? |