NONHSAT009613

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT009613

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

807 nt

Genomic location

chr1+:220800592..220801398

Exon number

1

Exons

220800592..220801398

Genome context

Sequence
000001 GAGGAAGAGT TCTCTGACTC TGATGAGGTG AGAGAGGGTG GCCACAAGAA CTCTTCCAAC TTCAAAAAAG CCAAGAGAGT 000080
000081 CAAAACAGGA TGGAAAAGAG AAAGACCTAG ATGAGAAGAG CAAAGTCACA GAAGAGGAGA AAACCAAGGA GGAGAAGCCA 000160
000161 GAAGCCAAAG GGGTCAAGGA GGAGGTCAGG TTGGCCTGAG CAGACCTCTC CAGCTCTGGC TTCTTGCCAA GTCCCCTGCC 000240
000241 TTTCTCCACC AACACCTCAG ATTTTATGCT TTCTATTTCT CTGTGTATTT ATAGGAAAGT TTATTAAATA TAAATATCCC 000320
000321 CAGGGACTAG ACAGAAACCA AGGCCCTGAG CCCAGGGCAG CTATGCTGGG TGAACTCTTC TAGGAGCTGC CTTGCCACCC 000400
000401 ATCCTTCCAT CCTTCCCCAG TTCTTAACTT TGAACCATAA AGAGTACCAG GTTTGGGTGA AAGGGATACT TTCATGCAAC 000480
000481 CATAAGACAA AATCCTGAAA ATGCCAAATG CCTGCTTAGT AGCTTTGGAA AGGTACCCTT ATTGAACATT CTAGAAGGGG 000560
000561 TGGCCAGGTC TTCAAGGGTC TCCCGTTCTT TTCAGGCTGC TAATGTAACA TCAGCCATTT TTAGATTGGC TCTGTCCTCA 000640
000641 TACCTTCCCA GTGGCCTCAG GTGAGCCAAG AAACTCACAC TGCCTGCCCT TTGTCTTCCC CTAATTCTGC AGGTGGAGGT 000720
000721 TGGTGGTCTA GTTTCCTTTT TGAGATACCG TTTTCATTTT TGAGACCTTT GTAATAAAAT GGTACATTTC TATACAAAAA 000800
000801 AAAATAA
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Predicted Small Protein

Name NONHSAT009613_smProtein_110:382
Length 91
Molecular weight 10375.1564
Aromaticity 0.0888888888889
Instability index 95.6211111111
Isoelectric point 11.1950073242
Runs 10
Runs residual 0.0287477954145
Runs probability 0.0548666313373
Amino acid sequence MRRAKSQKRRKPRRRSQKPKGSRRRSGWPEQTSPALASCQVPCLSPPTPQILCFLFLCVF
IGKFIKYKYPQGLDRNQGPEPRAAMLGELF
Secondary structure LLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLLHHHHHHHHHHHH
HHHEEEEELLLLLLLLLLLLHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH
HHHHLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTT
TTTToooooooooooooooooooooooooo