NONHSAT009852

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT009852

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1391 nt

Genomic location

chr1+:225965515..225978160

Exon number

3

Exons

225965515..225965636,225971002..225971070,225976961..225978160

Genome context

Sequence
000001 GGTGCGAGGA GGCGCCGCCA TCTTGGGGCT GCTGGGACTC GCGTCGGTTG GCGACTCCCG GACGTAGGTA GTTTGTTGGG 000080
000081 CCGGGTTCTG AGGCCTTGCT TCTCTTTACT TTTCCACTCT AGGCACGTGT GGTTCTCAAA TATAGGCATT CTGATGGGAA 000160
000161 CTTGTGTGTT AAAGTAACAG ATGATTTAGT TACCAAGCTC AAGATGTAAA GAAGATTGAG AAATTCCACA GTCAACTAAT 000240
000241 GCGACTTATG GTAGCCAAGG AAGCCCGCAA TGTTACCATG GAAACTGAGT GAATGGTTTG AAATGAAGAC TTTGTCGTGT 000320
000321 ACTTAGGAAG TAAATATCTT TTGAATTAGA GAAAGTGTTG GGACAGAAAG TACTTTATGT AACTAAGTGG GCTGTTCAGA 000400
000401 AGCTTAGAGG TCATTTTTTG TAATTTTCTT TTTAATTACT TTAGAGAGCT AGGGATGCAA ATGTTTTCAG TTAGAAAGCC 000480
000481 TTTATTTACT TTTGGAAATT GAACAAGAAA TGCATCTGTC TTAGAAACTG GAGATTATTT GATGTTAGGT AAAACATGTA 000560
000561 ATTGTTTCTC TGGCAAATTT GTATCAGTAA TTTGAAAATG AGATATTAGG AAAAACCAAT TCTTCTTAAA TTTAGTTCAT 000640
000641 CTTTCTTTAA AAGAACATTA AATGTAACCA TTTTGTCAGA TCCATGTATT TTGGAGCATA AAATGTATGC TGTTGTGACC 000720
000721 AATAAATATA AAATATGGTA ATTGGAATTA ACTCCACACC ATAGTATGCA TTGTTATACA TACTGTGTAC CTAATTATGT 000800
000801 ATAGCAGTGT AGTCTCAATT ATATCTGAAA GTAATTGTGA CTAACAAGTA TGCTTTGCCT TATTTCCACA TTTAAACTAC 000880
000881 CTGTTAATAT AAGGGATTTG TAGTATCAGC TTGTTGAGCA ATGACTTTGA ATCTAGTTTT CAGTGATCAG AAGCAGCAGT 000960
000961 TATTTGAGTG TATGAATGGA ATGATGATCA CTGTGCTATA ATGTACTGAA ACCACCATAT TACAGAAATA TTTACTACAT 001040
001041 ATTTTCCATC TGTAGTTTCT CAGAAGGGCT ATGGATTAGT TTGAACTGTC AAATCCTTGC ATACTTCTGT GACACCCCTG 001120
001121 CCCATTTTCT GTCTTTAATT AACCAAGGTG TTAGGTGTGA CTGTCACAAC TGTTATGTTT TCCAGTAAAC TAGAAGTACG 001200
001201 ATATTTGATA ATTATATTTG TATTTCACCA CCTAAATGTA ATGTTGATTC CTCAAGAATG AAATGAAGGC ACTACATTGA 001280
001281 AATATGTTTT GTATAAATTT GTCATGTTGA ACAGCATTTT AGCATGGTAA GTTCCCTTAG CTATATGAAT TTTGGCATGT 001360
001361 TTCAGAGAGA TCAGtaaata aaatattaga t
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Predicted Small Protein

Name NONHSAT009852_smProtein_920:1000
Length 27
Molecular weight 3035.6427
Aromaticity 0.0769230769231
Instability index 47.5576923077
Isoelectric point 4.36907958984
Runs 6
Runs residual 0.0214669051878
Runs probability 0.0249808632162
Amino acid sequence MTLNLVFSDQKQQLFECMNGMMITVL
Secondary structure LEEEEELLHHHHHHHHHHHHHHHEEL
PRMN -
PiMo -