NONHSAT009902

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT009902

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2299 nt

Genomic location

chr1-:226920314..226922612

Exon number

1

Exons

226920314..226922612

Genome context

Sequence
000001 TGATGTATGA ATTAAATGAA AACCATACTT TGAGCTAAGC AGATGGTTTC TTCAGTATCA TAGGCACCTG AGTGTTATCT 000080
000081 CCGGAGTAGG TACCTCCTAA TGGATGTACA TGTCAGTTGG TACAGGTTGA CATTTCAGGT ATGTTTTCAC GTGCCTCTGG 000160
000161 TTTGGGTCAT CACACTGACA TCTTGTTCTG GTTATGGCAG TAGACAGGAG TTTATTTCTA TTACATGGTT AATCGAACTT 000240
000241 GTAGGCTGCT TTTACTCTTA GGAGGATCAG AGTATCTTAC AGAAGACATA GGAGTTGAAG CTAGCACTTC TGAAAAGGTC 000320
000321 TGGGCTTTCT CTTAGCTTTT CCAGAGAGCA TGGGGAATTT CCTAGTTCAG TGTGCCAGGG GTGGTTGTGC TATATTGGGG 000400
000401 GAAAGTCTGC ATTTTATTAT AGTAGGTAGC CTTCCGATTT CATCTTGAAT ATCAAATACT CTTCACTGTA CCTCAATAAC 000480
000481 TTTCTCCACC ACGACTGGGA GCTTTATGTT TCTACTCTGC ATTCTTCACT AAGGTATTTT GGACCACAAA ACATACTCCT 000560
000561 CTCTGATTCC CTATTCACGA ATCACAGTCT GGATTTTTGA AGACCAGGCA TTCCTTTTCA TGAAACTCTG CTTTTTGCTG 000640
000641 ATGATCTGGA GGCAAATGTG TATGCAAAAT CGCCCCAATC AGCCTGGCAT TTTGTGGCTA GGACAGGGCC CCTGGGCATT 000720
000721 ATGCACCTGC TGTCAGGCAT AGGCGCACCA CCTTTAGAGG GGGAAGCGGT CCACCTGGAA GGGGATGGTG GTCAAGGGCA 000800
000801 GGTGGGAAAT ACTTCTTTCT GAAGGCATGG GCCAGATTTC TCTTTCTGCC CAGCAGTTAG AGGTCTACTG AATAAGAGAT 000880
000881 GGTCCCCCGT CCCATCCCTC CCAGTTGCTT TTGAACTCCT GAAGCATAGC TGAAACAGCC AAAGTCACTT TAACTTGTTC 000960
000961 CCTGACTGTC CATTCACCCT TTCTAGTGGT AGATTAGCAA CTTCTATTGG CTGGTTGTCA AAACAGTTTG TGTCCCGATG 001040
001041 TTTGAAAACG GCTCTTGTCT AGAAGAGAAT TAACAGGGAG ATCAATAACG ACAGGTGACT TTTTTTTCCA TTTGCCAGAA 001120
001121 CGATGCCATT TGAGAAACCA GAGGGTTAAG TGGTGTTTTT AAGTTAGTGA ACATATCCAG AGGTAGAAAC GAGGCCAGCC 001200
001201 TGTTGTCCAG TCTACCTCCC ACCTTTAAAC AGGTTTTCAG ACACCCGCAG AGCAGAGCCA GGGAAAAATC CCCTGCCGGC 001280
001281 TTTGCTCTCT GAATCACATG AGACTGGTGG GAAGTGGGGT GGGTGTGTGT GTGTGTGTGT AGGGGGGTAA GGGTGGGTAA 001360
001361 CCAACTGGAA ATTATGGGAT CCTAGGGACT TTTGAGCTTT GGTTGAGTGC TTGCACGATA AGCAAAGTTT TCTTCTTGTA 001440
001441 CAGATTGTTA CGCTGGAGCC TTATCTGTGA CACCCAAACA TCAGCTCATT GGGTCAAAAA TCACTTGATT ACCTGCAATA 001520
001521 GATATTTTGT CTACAGAAGG CCAGACATCT TGATGGAGTG AGTCTTTTGG CTGGGCCTTT CTGTGTTTGA TAGATAAAAG 001600
001601 CCCCACCAGC TCTGTCTGAG GTTCTACCAA ACTGATGTAG CATTCTCTTT TCTGGACTTT GCTGTGTCTG TCCAGCTACT 001680
001681 GCACAACGCT ATAGCTGCAC ACTCTCATGC TTGCTCACAC TTGCTTACAC TTGCCCTCAC ACATGCCCTC ACACATGCTC 001760
001761 ACACTTACCC TCCTATGCTC ACACAGGTTC CCCCTTGCTC ACCCCACTCA CACAGGTCTG AAATGGCATG TTCAGCGTTC 001840
001841 CAGTCACATA ACCAACCCCT GGCCCTCAGA CCCACACTAG ACACTGAGAT TGTTTCTGTG CTGCCCTACC TTCCCACAGA 001920
001921 GTTAAGCCTT TCGGGCCTCC TGTGGCGCTT TCTTCATCCT TGCTGAGGAA TGAGTGTGTA TGACTTGGTG TGCAGGCAGG 002000
002001 GGGTGACAGT ATATCTGCTT AGTAGGGATC AGACACTTGA AATTTGCTCA GAAATAGTTG CATTACACGC CCAGTGTGCA 002080
002081 ATGGCTGAAA TTCAGGCACA TTCATGCTTA CTGTTCTCTG AGATCTGAAC AAAATCAAAT TGCACTGAGC AAGGATAGTG 002160
002161 CTCAATCTTT TGTTCTTTCT GACAACTAAA AATTAACCAG CGGTTGTTTA CTTCCCTATA TAATTCTGTT TAAGAGAATC 002240
002241 TGGACCATTG AGACACCAGG CTTAAAATGT TGTATTAAGA TATAAAAGTA CCTTACTTT
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Predicted Small Protein

Name NONHSAT009902_smProtein_1706:1879
Length 58
Molecular weight 6545.5463
Aromaticity 0.0526315789474
Instability index 48.001754386
Isoelectric point 8.94683837891
Runs 7
Runs residual 0.0311403508772
Runs probability 0.043795896737
Amino acid sequence MLAHTCLHLPSHMPSHMLTLTLLCSHRFPLAHPTHTGLKWHVQRSSHITNPWPSDPH
Secondary structure LLHHHLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLL
PRMN -
PiMo -