NONHSAT010007
Revision as of 19:56, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010007 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
583 nt |
Genomic location |
chr1+:228481896..228482842 |
Exon number |
2 |
Exons |
228481896..228482116,228482481..228482842 |
Genome context |
|
Sequence |
000001 CACAGAAGGG GACACGGCCA CGCTGTGGTG TGAGCTGAGC AAGGCGGCAC CGGTGGAGTG GAGGAAGGGG CATGAGACCC 000080
000081 TCAGAGATGG GGACAGACAC AGCCTGAGGC AGGACGGGTC CAGGTGTGAG CTGCAGATCC GTGGCCTGGC TGTGGTGGAT 000160 000161 GCCGGGGAGT ACTCGTGTGT GTGCGGGCAG GAGAGGACCT CAGCCACACT CACTGTCAGG GCCCTGCCTG CCAGATTCAT 000240 000241 AGAAGATGTG AAAAACCAGG AGGCCAGAGA AGGGGCCACG GCCGTGCTGC AATGTGAGCT GAGCAAGGCG GCCCCCGTGG 000320 000321 AGTGGAGGAA GGGGTCTGAG ACCCTCAGAG GTGGGGACAG ATACAGCCTG AGGCAGGATG GGACCAGATG TGAGCTGCAG 000400 000401 ATTCATGGCC TGTCTGTGGC AGACACTGGG GAGTACTCGT GTGTGTGCGG GCAGGAGAGG ACCTCGGCCA CACTCACCGT 000480 000481 CAGGGGTAAA GACCACATGT GGCCACCTGA GTGATTCCTG TCTCCTCCCA CCTAACCCAC ATGATCTGTG CTCTCCCAGT 000560 000561 TCCTCTTGAT GTCATTGCCA TCT |
Predicted Small Protein
Name | NONHSAT010007_smProtein_377:568 |
Length | 64 |
Molecular weight | 6653.5735 |
Aromaticity | 0.031746031746 |
Instability index | 81.8396825397 |
Isoelectric point | 8.69134521484 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.022737022737 |
Amino acid sequence | MGPDVSCRFMACLWQTLGSTRVCAGRRGPRPHSPSGVKTTCGHLSDSCLLPPNPHDLCSP SSS |
Secondary structure | LLLLLLHHHHHHHHHHLLLLEEELLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLL LLL |
PRMN | - |
PiMo | - |