NONHSAT010147

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT010147

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1448 nt

Genomic location

chr1+:231008160..231011600

Exon number

2

Exons

231008160..231008294,231010288..231011600

Genome context

Sequence
000001 tatgaacaat catgcgcagc cccttcacca tgggatgccc tataccacct ggggactctg cagagagtcc tcaccagcaa 000080
000081 gaaagacctc accagatgca gccactcaaa tttggacttg tcagcctccg taattCTTGG CTTGAAGGAG TACTTTAGGA 000160
000161 CTCAGAACAA CAGGATGAAG ACAGCAGCTA AAATAGAACA CACCAGCAGA GACGTTCAGC TCcttgagct gtgcttccga 000240
000241 agctcaagca tggcagagtg gccttgttaa atcagagttc agggtgccac cctgacagtt tctgattccg taggtgccca 000320
000321 gtagggacca agaatccttt ttttttttcc tttttctttt taatagagtc agggtcttgc tatgttgccc acatgggtct 000400
000401 caaattcaag cgatcctccc acctcgacct cccaaagcac tggaattcca ggcataagcc accgtgcctg gccaagaacg 000480
000481 tttttttttt taacaagttt ctaaatgatg ctggtctatt ggtcctggga ccacactttg aaaTTGGTGg gataggaggc 000560
000561 tgggatcttt atccattcac tcaactccca ttccccatgg ttgaaagttt ccctggggca tCCCTGGGAG GCCTGGGGGC 000640
000641 TGACAAGATT CAAACGTTTT GGTGAAAAGC CCCAAGACAG TGAAGTGGGG TGTGCTTGAA GTGGGGCACC GTCATCACCC 000720
000721 ACCTACCCAC CACAGAGGTG AGCTAAAAGG TAAGGTGTGG CTCACAAAAA TCTTCTGCTA AATACCTATC TTTGCCTCCA 000800
000801 TTTCTTCCTC TTTAAGACGG GGGTAACTGT ACCAGTGTTC TAGGGTAACA TGTACCACCC TTGAATACAG TGTTGCTCCC 000880
000881 TGTCATGACT CACGGACAGG TTACCAGACC GGAGCCTCCA GCAATCCAGG AGCACAAACA AGGATGCCTT AAAACAAAAC 000960
000961 TTGTGTCAGG GTACCCTTCG CTGCCTCAGA GGAAATCAGA ATGACCTGGT GGACAACTGT TCATAAGGAC AAGAGCCAGT 001040
001041 ATCACTGCCT TTGAGTCCCA GCCTCCTCAA ATCCATTTTC TGCCCTGCAC CACCTCATCA TATCCCGGAT ATTGTTAGTG 001120
001121 TCGTGTCATT TCATGACTCA GGAGCTGCGG GTGACTTTGG TAAGAGCGGA GCGGTCGCTG TCTCATCTGT CACCTCCTCC 001200
001201 CTTCACCTCT GTGCAGCCAA CGTCCAGGGA GCCTGCCTCT TGCTGTCCTT TTCAAAGCTT TCTGGGTCTC TCCTCTGTGC 001280
001281 CTCTGATCCA GTCTTTCATG CTGCCCAGAA CACTGTCTCT TTCTCCCATG CCAGTGACAT CCATTACTTT CTTCAAGGTC 001360
001361 TGGCTCAAAA CCCAGCACTC Agccaggcac ggtggctcac acctgtaatc ccaccacttt gggaggccaa agcaggcaga 001440
001441 tcacgagg
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Predicted Small Protein

Name NONHSAT010147_smProtein_392:664
Length 91
Molecular weight 10087.621
Aromaticity 0.155555555556
Instability index 47.9766666667
Isoelectric point 9.30194091797
Runs 13
Runs residual 0.00458553791887
Runs probability 0.0158031334502
Amino acid sequence MGLKFKRSSHLDLPKHWNSRHKPPCLAKNVFFFNKFLNDAGLLVLGPHFEIGGIGGWDLY
PFTQLPFPMVESFPGASLGGLGADKIQTFW
Secondary structure LLLEEEELLLLLLLLLLLLLLLLLHHHLLHHHHHHHHHHLLLEEELLLEEELLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLHHHHHLLL
PRMN -
PiMo -