NONHSAT010652
Revision as of 19:59, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010652 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1054 nt |
Genomic location |
chr1+:244979095..244980624 |
Exon number |
2 |
Exons |
244979095..244979620,244980097..244980624 |
Genome context |
|
Sequence |
000001 CTCGCGGCTG CTCTCTCTCT GGAGTAGCCA TTCTTTTATT CCTTTACTTT TCCTGATAAA CTTGCTTTCA CTTTACAGAC 000080
000081 TTGCCCTGAA TTATTTGTTG CACGAGATCA AAGAACCCTC TCTTGGGGTC TGGGTCGGGA CCGCTTTTCA GTAACATCTT 000160 000161 TCTGGTGATC ACGGAAGAGA CTATAGTGTG GAAACACCCG ACCCAAAGGC TAACTTTGAG CCCGGTGTGG TGGCACGCAC 000240 000241 CTGTAATCCC AGCTACTCAG GAGGCTGAGG CAGGAGAATC GCTTGAACCC CAGCGACAGA GGTTGCAGTG AGCTGAGATC 000320 000321 GCACCACTGC ACTCCAGCCT GAGCGACAGA GCAAGACTCT GTCTCAAAAA CAACAACAAC AAACAACAAC AACAAAAAAC 000400 000401 CAAAGGCTAA CTTTGGGTAA GTGATGGGGT TCAGTAACAT CTTTCTGGCA AATCATGGAA GGGACGATAC TGAAGAAACC 000480 000481 CCCGACCCAA AGGAAATAGA CTGGAGCACT GATTGGCCGA CTTTGGATTA ATCTGCCTTG CACTCTTTGC TGATGGCTGT 000560 000561 GGGTGACAGC ATTAAGCGTG TACAGGATCG TGGGACATAG GGAGCTTTTT TCTCCCTAAA AGGGGAAACT TGAGAGCTGA 000640 000641 TGGGACTTCT GGAAAAGATC CCTTCACGAC CGACAAGCAG CCGCCTGGAC TTTTCAGTGT CACTGCAATG GGTGGGTCTT 000720 000721 TCTCTGGCCT CCCCGAGCAC CTCACCTTCC TCACCTTCCT CACCTTCCCC ACCCTGCCTC AGGCAATGCA TTCCTCTCTC 000800 000801 TCTGTGCAAA TGGGTTAAAT GGTAAAAATC ACTGTTTATC TCCTCTATGA AGTTTTGATG AATGGAAGAA AGGATTTGCG 000880 000881 AGGCTAATCT TAAACTGTAG TGAATCTGGT GTGCTTTGCC TGTCTTTCTG TGTTCTGTGA TGGAGAGGAG TATCTTAGGA 000960 000961 CAGAATGAGG GCCTAGGACA CCTATAAGCC CGCTGTTCAG AGACGGCCCA GCACACTGGT CAGTTAAAAA CTTCGGCCGG 001040 001041 GTGCGGTGGC TCAC |
Predicted Small Protein
Name | NONHSAT010652_smProtein_707:817 |
Length | 37 |
Molecular weight | 3868.4569 |
Aromaticity | 0.111111111111 |
Instability index | 68.8277777778 |
Isoelectric point | 5.94097900391 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0326923562217 |
Amino acid sequence | MGGSFSGLPEHLTFLTFLTFPTLPQAMHSSLSVQMG |
Secondary structure | LLLLLLLLHHHHHHHHLLLLLLLLHHHHLLEEEELL |
PRMN | - |
PiMo | - |