NONHSAT010668
Revision as of 19:59, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010668 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1201 nt |
Genomic location |
chr1+:245133588..245255108 |
Exon number |
6 |
Exons |
245133588..245133745,245222688..245222760,245245385..245245464,245246744..245246786,245246924..245246990,245254329..245255108 |
Genome context |
|
Sequence |
000001 AAGGGTCTTC CTCCCCCGGG ATTCAGAGCG GCCCCTCCTC CAGGCCAGGC TCGCCGCGGG GCGCTGAGCA GGCCGGGACA 000080
000081 CCGCGGCCGA GGTTATCGTT AGGCATCTCC CAGGCGACCG GCTCCGCAGC AAGATGGCGG ACGAGAAGGA CAGGGAAGAG 000160 000161 AGATTGGAAC AATTATCAGG TCATTAGGAT GCTGTCCTAC GGAAGGAGAG CTGCATGATC TGATTGCAGA GGTAGAGGAA 000240 000241 GAAGAACCCA CTGGATACAT TCGATTCGAA AAATTTCTTC CGGTGATGAC AGAAATACTA CTAGAAAGAA AATACAGACC 000320 000321 AATTCCAGAA GATGTCCTTC TTCGAGCTTT TGAGGTTTTA GATTCAGCTA AACGTGGGTT TCTTACTAAG GACGAGCTGA 000400 000401 TCAAGTATAT GACTGAAGAA GGATAACCTG AGATTTTCCC AAGGTAAAAT CCAAATAGAG ACCTGATGTG CCACTGGCTC 000480 000481 GGCCGTGCAT GCTAGAATCA CCAGCCAGAG ATGAGGATGA ACCGCGTGCC TTCAGGACAG GGCGGAGACG GAGGAGGAAA 000560 000561 GGAGTGTGGT GATCCTCGGA ACATCAGCAG ACAGGCTGTT GATGATAGGA ACACATTGCA GCGGGGAAGG AGGATGGCTG 000640 000641 AGATATGAAA TACCCTTCAA GGTGGACGCA TACCCAGGGG CATGTCATTC GGTGGCAGGG GCCAGCACGG ACATGCAGCA 000720 000721 CTGAGGCGTG TGCTAGCGCC CAGTGCGTCG ACCCAGGCAC GGACTTGTTT GGAGCATACA GGACAGCTCT GCGTTAAGAC 000800 000801 CTGTAAGCCA TTAAAGAAGT ACAGTCTGGT GAATGAACCC TAATCTCTTG ATGATCAAGT GATGACATCA TATTCTGTCT 000880 000881 CCGAGGAGAC ACCCTCTTGC ACAGAAGGCA GTAGAGGAAG CTTGCGTCGA GATTGCCTAC CTCCCCAGCC CCACCTTCGA 000960 000961 GGGTTCTTTC AAAAGTTCGG ACTGATGTTC AACTTCACAT CTTGTCTCAA GGCAATCCTC TCTGTTTAGT CTCATAGAGT 001040 001041 TGGCTTTGTG GAATGTAATT CATTTTTATC TTTAGCACAA ATTTGTCTGT TTCTTTTAAG GCCACCAGAA AGCACAACAT 001120 001121 AGACTCCCCA CAGAAATCTC ATTTTATCTC CTAAGTTGCA GAATAAACGT ACCTTGTTTG CAAAGGGAAC ATTTTCCTTT 001200 001201 A |
Predicted Small Protein
Name | NONHSAT010668_smProtein_644:796 |
Length | 51 |
Molecular weight | 5583.2441 |
Aromaticity | 0.1 |
Instability index | 44.406 |
Isoelectric point | 9.09820556641 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0414630316591 |
Amino acid sequence | MKYPSRWTHTQGHVIRWQGPARTCSTEACASAQCVDPGTDLFGAYRTALR |
Secondary structure | LLLLLLLLLLLLEEEELLLLLLLLLHHHHLLLEELLLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |