NONHSAT011715
Revision as of 20:04, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011715 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
344 nt |
Genomic location |
chr10+:21823678..21884313 |
Exon number |
5 |
Exons |
21823678..21823733,21827762..21827841,21830192..21830290,21875223..21875277,21884260..21884313 |
Genome context |
|
Sequence |
000001 CGAGAACCCG CTGGTTTATT GCGACGGGCA CGGCTGCAGC GTCGCGGTGC ATCAAGCTTG CTATGGCATT GTTCAAGTAC 000080
000081 CCACTGGACC GTGGTTTTGC AGGAAATGTG AATCTCAGGA GAGAGCAGCC AGAGTGgctg gagtggagtg gcgcaatcat 000160 000161 tgctcactgc agccttgaag tcctgagctc aagagatcct cctgccgcag cttcctgagt agctgggact tacagAGATG 000240 000241 TGAACTTTGT CCCCATAAGG ATGGAGCTTT AAAAAGAACA GATAATGGGG GTTGGGCCCA TGTGGTTTGT GCCCTGTATA 000320 000321 TTCCAGAGGT ACAATTTGCC AATG |
Predicted Small Protein
Name | NONHSAT011715_smProtein_62:217 |
Length | 52 |
Molecular weight | 5671.3837 |
Aromaticity | 0.0980392156863 |
Instability index | 41.1588235294 |
Isoelectric point | 5.59613037109 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0209074620839 |
Amino acid sequence | MALFKYPLDRGFAGNVNLRREQPEWLEWSGAIIAHCSLEVLSSRDPPAAAS |
Secondary structure | LLLEELLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLEEELLLLLLLLLL |
PRMN | - |
PiMo | - |