NONHSAT011715

From LncRNAWiki
Revision as of 20:04, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT011715

Source

NONCODE4.0

Same with

,

Classification

sense

Length

344 nt

Genomic location

chr10+:21823678..21884313

Exon number

5

Exons

21823678..21823733,21827762..21827841,21830192..21830290,21875223..21875277,21884260..21884313

Genome context

Sequence
000001 CGAGAACCCG CTGGTTTATT GCGACGGGCA CGGCTGCAGC GTCGCGGTGC ATCAAGCTTG CTATGGCATT GTTCAAGTAC 000080
000081 CCACTGGACC GTGGTTTTGC AGGAAATGTG AATCTCAGGA GAGAGCAGCC AGAGTGgctg gagtggagtg gcgcaatcat 000160
000161 tgctcactgc agccttgaag tcctgagctc aagagatcct cctgccgcag cttcctgagt agctgggact tacagAGATG 000240
000241 TGAACTTTGT CCCCATAAGG ATGGAGCTTT AAAAAGAACA GATAATGGGG GTTGGGCCCA TGTGGTTTGT GCCCTGTATA 000320
000321 TTCCAGAGGT ACAATTTGCC AATG
[back to top]

Predicted Small Protein

Name NONHSAT011715_smProtein_62:217
Length 52
Molecular weight 5671.3837
Aromaticity 0.0980392156863
Instability index 41.1588235294
Isoelectric point 5.59613037109
Runs 7
Runs residual 0.0169869928169
Runs probability 0.0209074620839
Amino acid sequence MALFKYPLDRGFAGNVNLRREQPEWLEWSGAIIAHCSLEVLSSRDPPAAAS
Secondary structure LLLEELLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLEEELLLLLLLLLL
PRMN -
PiMo -