NONHSAT011743
Revision as of 20:05, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT011743 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
748 nt |
Genomic location |
chr10+:22610388..22615869 |
Exon number |
2 |
Exons |
22610388..22610625,22615360..22615869 |
Genome context |
|
Sequence |
000001 ggccgaggcg ccggaggagg ccgaggcgcc ggagcaggag gaggCCGGCC GGAGGCGGCA TGAGACGAGC GTGGCGGCCG 000080
000081 CGGCTGCTCG GGGCCGCGCT GGTTGCCCAT TGACAGCGGC GTCTGCAGCT CGCTTCAAGA TGGCCGCTTG GCTCGCATTC 000160 000161 ATTTTCTGCT GAACGACTTT TAACTTTCAT TGTCTTTTCC GCCCGCTTCG ATCGCCTCGC GCCGGCTGCT CTTTCCGGGA 000240 000241 TTTTTTATCA AGCAGAAATG CATCGAACAA CGAGAATCAA GATCACTGAG CTAAATCCCC ACCTGATGTG TGTGCTTTGT 000320 000321 GGAGGGTACT TCATTGATGC CACAACCATA ATAGAATGTC TACATTCCTG TAAGTACCGA GCTTTAGCTC TCTTTTGTAT 000400 000401 CATGCGTATT TCACAGTTCG ACCTGGAATT TGAAAACTGT TAATGATTCC TGCAATCTGT GGAAATGTTG GTACAAAGTG 000480 000481 GTGAAGGCAT TTTCTTCTCT TGCATCTAAT GACTTTTTGT TAATATGTAT TGATTGTATT ACAAGCATGC AATATATGTG 000560 000561 TTCTCAGGAT ATGAATTAGC TTATTTAGTT GGAAATGCCT TTCACCATCT TGTTTTCTAC TAGTTCTGGG TTTCTAACAC 000640 000641 CAATGATTTA TCCACTCATT TCTAAACATA AAAAAACTTC ACATGTTCTA CTTCTAGTCT GTAAAACGTG TATTGTTCGT 000720 000721 TACCTGGAGA CCAGCAAGTA TTGTCCTA |
Predicted Small Protein
Name | NONHSAT011743_smProtein_257:442 |
Length | 62 |
Molecular weight | 7128.4358 |
Aromaticity | 0.0983606557377 |
Instability index | 40.8950819672 |
Isoelectric point | 6.79278564453 |
Runs | 13 |
Runs residual | 0.0602977199925 |
Runs probability | 0.0465125759243 |
Amino acid sequence | MHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSCKYRALALFCIMRISQFDLEFEN C |
Secondary structure | LLLEEEEEEELLLLEEEEEELLLEEELHHHHHHHHHLLHHHHHHHHHHHHHLLLLLEEEL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL L |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooooooooooo o |