NONHSAT012642
Revision as of 20:06, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT012642 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
919 nt |
Genomic location |
chr10-:32556715..32557633 |
Exon number |
1 |
Exons |
32556715..32557633 |
Genome context |
|
Sequence |
000001 AGATGAAGTG TCATCACATC ATGTGCATGG TGCGGAACCT GCTGTTTTAT CTATTTATTG TGCCGTGTTT ACAGTTTTTT 000080
000081 GTACACTGTA CCTTCATTGG TTCCTGTGCT GTAGTAAATG TGTTAGGTAG CTGTGGACTC CTTGGTATTT TGTAAATGGT 000160 000161 ATAACATAAC TTGGTTCCCC TCTGGGTCCT TGAGTTTTCT GTGTATCATG TGAAAAAAAA TGGTGACATA CATACAGAAT 000240 000241 TTTACAAAAA AAAAAAAAAA AAAAAAGGCA TCAGTTTTTT TAAAAATGGG GAATGTACTA TTAAATGGGG ATCTTCCTGG 000320 000321 TCTACTATCA TTAGGACAAG TAACAAGCTA AAAATGAAGT CTCTTGAATC TTTCCATCCC CAACTTGCCC ACAAAGCTGT 000400 000401 GGGTGGTTTC TGGTACTTAA AGCACTAATA TTATGTTGCT GCTCTGCGAA CAGCCCAGTA GTCCCATTTC CTTCCACACC 000480 000481 AAAAAGTGTT AAATCAAGTA TGCAAATGGA GTCCTTACAA CTGGAGTTTA TGTTGTCTTG CCCTTTTTTT AGCACAAAAA 000560 000561 AAATTGTACT TTTTTATTGT CGAATTGTTT AAAAGACTTC ATTCTTTACT TGTTCTTACG AAAAGGATAT AAGGGAGAAG 000640 000641 AATGCAGTAA TTGCTGTACG TGTATCATCA TTCCAGTTTC TAAAAACAGC CAGCCAGCTT TTTTCCTTTT AAGATTCTCC 000720 000721 AGAAGGCTGC AAGGCCAGAA CCACAAATAT CGGGTGCCTT CCTTTGGAAA TATTTGACCT CTCTTCTGTG AAGAGAATGG 000800 000801 TACTTAACAG ACTACTACTA GTGCTTTGTC AGTACCGAAG TCTGAATGCC CAGTCCAATG GCATACATTA TCCTTAAGGT 000880 000881 TTTTAATCCC ACCTGGAAAA ATTGTGATAG AATTCTCAC |
Predicted Small Protein
Name | NONHSAT012642_smProtein_2:154 |
Length | 51 |
Molecular weight | 5605.9472 |
Aromaticity | 0.12 |
Instability index | 74.3082 |
Isoelectric point | 8.31146240234 |
Runs | 10 |
Runs residual | 0.0353216374269 |
Runs probability | 0.0400370959195 |
Amino acid sequence | MKCHHIMCMVRNLLFYLFIVPCLQFFVHCTFIGSCAVVNVLGSCGLLGIL |
Secondary structure | LLLLHHHHHHHHHHHHHHHLHHHLEEEEEEEEELEEEEEHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTooooooooooooooooo |