NONHSAT013094

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT013094

Source

NONCODE4.0

Same with

,

Classification

sense

Length

636 nt

Genomic location

chr10+:45938061..45938895

Exon number

2

Exons

45938061..45938664,45938864..45938895

Genome context

Sequence
000001 CAGGCCCTCA ACAGAGTTGC ATGGGTCCTG GAAACTGAGG GTCACTGAGA GCAATGACTG AGGGTCGTGT GCTCAGCACT 000080
000081 AGAGCAGACT TCACAGCCCA GGCCCGCTGG TGCTGGGGTC CCCCACACAC CTGCCCACGC CTGCTGCCCT CCTGTGGCTG 000160
000161 GGAGCGCACC CTTCCCTCTT GTACTCTGCA GCCCCACGGT TCAGTCCCTT GCATTGGATT GGGCGGGAGG CTCCTCCCTA 000240
000241 GCACCTCTCC ACCCGGCTGC CCTTGTCATT CTCTGCGTTA AACATCCCTC CCCCATCTCA CAGGACAAGG GCTTGCACCT 000320
000321 CTGCCTGCCT GGCCTCCTCG CCTCCCCTGG CACATTTCCT CAGGGATGGG TCTGGACAGC TGTGGGAGGA GCCACCCGCT 000400
000401 CAGGGCACTC TACCTCCCAC TCCAGGCCAA CGCCACAGGG GGCGGTGGGC ACGTGCAGAT GGTGCAGAGG GCCATGAAGG 000480
000481 ACCTGACCTA TGCCTCCCTG TGCTTTCCCG AGGCCATCAA GGCCCGGGGC ATGGAGAGCA AAGAAGACAT CCCCTACTAC 000560
000561 TTCTACCGGG ACGACGGGCT CCTGGTGTGG GAAGCCATCA GGACGTTCAC GGCCGAGGTG GTAGACATCT ACTACG
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Predicted Small Protein

Name NONHSAT013094_smProtein_53:280
Length 76
Molecular weight 8096.3244
Aromaticity 0.0533333333333
Instability index 78.188
Isoelectric point 8.87799072266
Runs 11
Runs residual 0.0022695035461
Runs probability 0.0189012541954
Amino acid sequence MTEGRVLSTRADFTAQARWCWGPPHTCPRLLPSCGWERTLPSCTLQPHGSVPCIGLGGRL
LPSTSPPGCPCHSLR
Secondary structure LLLLEEEELLLLHHHHHHHHLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLEELLLLEE
LLLLLLLLLLLLLLL
PRMN -
PiMo -