NONHSAT013094
Revision as of 20:08, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013094 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
636 nt |
Genomic location |
chr10+:45938061..45938895 |
Exon number |
2 |
Exons |
45938061..45938664,45938864..45938895 |
Genome context |
|
Sequence |
000001 CAGGCCCTCA ACAGAGTTGC ATGGGTCCTG GAAACTGAGG GTCACTGAGA GCAATGACTG AGGGTCGTGT GCTCAGCACT 000080
000081 AGAGCAGACT TCACAGCCCA GGCCCGCTGG TGCTGGGGTC CCCCACACAC CTGCCCACGC CTGCTGCCCT CCTGTGGCTG 000160 000161 GGAGCGCACC CTTCCCTCTT GTACTCTGCA GCCCCACGGT TCAGTCCCTT GCATTGGATT GGGCGGGAGG CTCCTCCCTA 000240 000241 GCACCTCTCC ACCCGGCTGC CCTTGTCATT CTCTGCGTTA AACATCCCTC CCCCATCTCA CAGGACAAGG GCTTGCACCT 000320 000321 CTGCCTGCCT GGCCTCCTCG CCTCCCCTGG CACATTTCCT CAGGGATGGG TCTGGACAGC TGTGGGAGGA GCCACCCGCT 000400 000401 CAGGGCACTC TACCTCCCAC TCCAGGCCAA CGCCACAGGG GGCGGTGGGC ACGTGCAGAT GGTGCAGAGG GCCATGAAGG 000480 000481 ACCTGACCTA TGCCTCCCTG TGCTTTCCCG AGGCCATCAA GGCCCGGGGC ATGGAGAGCA AAGAAGACAT CCCCTACTAC 000560 000561 TTCTACCGGG ACGACGGGCT CCTGGTGTGG GAAGCCATCA GGACGTTCAC GGCCGAGGTG GTAGACATCT ACTACG |
Predicted Small Protein
Name | NONHSAT013094_smProtein_53:280 |
Length | 76 |
Molecular weight | 8096.3244 |
Aromaticity | 0.0533333333333 |
Instability index | 78.188 |
Isoelectric point | 8.87799072266 |
Runs | 11 |
Runs residual | 0.0022695035461 |
Runs probability | 0.0189012541954 |
Amino acid sequence | MTEGRVLSTRADFTAQARWCWGPPHTCPRLLPSCGWERTLPSCTLQPHGSVPCIGLGGRL LPSTSPPGCPCHSLR |
Secondary structure | LLLLEEEELLLLHHHHHHHHLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLEELLLLEE LLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |