NONHSAT013947
Revision as of 20:12, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013947 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1044 nt |
Genomic location |
chr10+:74970025..74995210 |
Exon number |
6 |
Exons |
74970025..74970196,74987818..74987942,74990180..74990283,74992697..74992955,74994575..74994698,74994951..74995210 |
Genome context |
|
Sequence |
000001 GGGAAGAAAT CAGAAGCAGC TACAGAGAAA CAGAAATTAG GGTATCCTCC CATTGCTCCA TTTTACTGCA TGAAAGAAGA 000080
000081 TGTCCTTGCT TATGTGTTTG ACAGTGTATG GTGCAAGGTT GTGAGCTGTA TGGAGCAGTT GACACGTAGT CACTGGGAAG 000160 000161 GATTTGCCTC TGATGATGAG AGTAATGTTG CAGTTACCAG ACCCGATTCA GAAAGTTCCT GTGTGCTGAG TGAACTACAT 000240 000241 CCTTTGGTGT TACCGCGAGT GCCACAGTCT AAGGTGCTGT ACATTACCTC AAATCCGATG AGTCTCTGTC AAGCAAGCAG 000320 000321 ACATCAGCCA AATGTGAATG ATCTCTTGGT TCATGGAATG CCTCTACAGC CAAGAAATCT CTCCCTAATG GACAAGCTCC 000400 000401 TAGATCTTGA TGACAAGCTA CTTATGAGGC CTGGGTCCAG TACCATCCTT TCAACTCGAA ATTGGCCAAA TCGAGCTGTG 000480 000481 GAGTTTAGTA CATCATCTCT GTCATACACA GTGCAGTCCA CCAGGAGACG CAATCCACCA CCACGAACTC TTCATCCGAT 000560 000561 CAGCACGAGC CATTCATGTG CTGAAACACC AAGATCTGTG GAAGAAATCC TCAGAGGAGC CCGAGTGTAG GTTTCAAAAG 000640 000641 CAGAACTTCT GGAAACCGTG CCCAGTGGCA CCCGACTCGC TCTCCTCTCC CTCACCGACG CCCCTGAGTC GAAATAATCT 000720 000721 GCTACCACCT ATTGGCACAG CTGAAGTGGA ACATGTGAGC ACTGTGGGGC CACAAAGACA GATGAAACCC CATGGCGACT 000800 000801 CTAGTCGAGC TCAAAGTGCG GTGGTGGATG AACCTAACTA TCAGCAGCCA CAAGAAAGGC TCCTTTTGCC CGACTTTTTC 000880 000881 CCCAGGCCCA ACACAACTCA ATCATTTTTG GTAGAGTGAC GTACTTCCTA GAATGGTCTT GATAGTTGGG GAAAGAAAAG 000960 000961 GTGGGGGGAA TAATAGTTTG GCAGACTTAA GATTTTATCT AGAGGCTTAA CCCAGAATAA AAGTTGAGTT TCCAACAATA 001040 001041 AAAA |
Predicted Small Protein
Name | NONHSAT013947_smProtein_791:913 |
Length | 41 |
Molecular weight | 4677.4318 |
Aromaticity | 0.15 |
Instability index | 51.85 |
Isoelectric point | 9.78533935547 |
Runs | 6 |
Runs residual | 0.0280241935484 |
Runs probability | 0.0219925808161 |
Amino acid sequence | MATLVELKVRWWMNLTISSHKKGSFCPTFSPGPTQLNHFW |
Secondary structure | LLLHHHHHHHHHHHHEEELLLLLLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |