NONHSAT015205
Revision as of 20:14, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015205 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
642 nt |
Genomic location |
chr10+:81691467..81710092 |
Exon number |
4 |
Exons |
81691467..81691574,81696287..81696412,81701193..81701291,81709784..81710092 |
Genome context |
|
Sequence |
000001 atttatttat tatagagaca ggatctccgt atgttgtcca ggctggtctt taactcctga cctcaagtga tcctccccaa 000080
000081 tcagcctccc aaagtgctgg gataacaggt tcatccctct ctgtgccttg gttttcatat ttggaaaatg acgaggagga 000160 000161 tttaactaga ttatctctaa ggtTGAATGG GGAAAGAACA TTCCTGGAAT CACCAGGCAA GAAGAGGATT GGAGGAATGC 000240 000241 CTTTGTCCCC CTTCAATCCC GGGGGTCCCC TGGCACCTGG ACTTCCCTGG GGACCCATGG CTCCAGCAGA CCCTGGGGTA 000320 000321 AAAGAAGAAC TGGagatggg gtctcactct gttgcccacg ctggtctcaa actcctggtc tcaagcaatt ctcctgcctc 000400 000401 agcctaccga agttctgaga ttacaagtgt aagccatcat acccagcAcc aatctgtatc ttttaagtgg aacatttact 000480 000481 ccatttatta tcaaggttaa tattgatatg tgatgttttg ttcctgtcat gataattgtt acccagttgc tttttagtct 000560 000561 caattatgta attgctttat ataatctgtg agtttttcac tttaatgtgc ttttatgatg aggagtattg tccattcatt 000640 000641 tc |
Predicted Small Protein
Name | NONHSAT015205_smProtein_236:499 |
Length | 88 |
Molecular weight | 9289.3301 |
Aromaticity | 0.0919540229885 |
Instability index | 59.3873563218 |
Isoelectric point | 6.48345947266 |
Runs | 13 |
Runs residual | 0.0111658456486 |
Runs probability | 0.0451605451605 |
Amino acid sequence | MPLSPFNPGGPLAPGLPWGPMAPADPGVKEELEMGSHSVAHAGLKLLVSSNSPASAYRSS EITSVSHHTQHQSVSFKWNIYSIYYQG |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLHHHHHHLLEEEEELLLLLLLEELL EEEEEEELLLLEEEEEEEEEEEEEEEL |
PRMN | - |
PiMo | - |